#include <qxrddataprocessorbase.h>

Inheritance diagram for QxrdDataProcessorBase:

Collaboration diagram for QxrdDataProcessorBase:

[legend]

Public Types
enum	{ NoOverwrite, CanOverwrite }

enum	{ ZingerNoMask = -2, ZingerDataMask = -1, ZingerTopStack = -1 }

Public Slots
void	printMessage (QString msg, QDateTime ts=QDateTime::currentDateTime()) const

void	criticalMessage (QString msg, QDateTime ts=QDateTime::currentDateTime()) const

void	statusMessage (QString msg, QDateTime ts=QDateTime::currentDateTime()) const

void	shutdown ()

void	showMaskRange ()

void	hideMaskRange ()

void	showMaskRange (double min, double max)

void	hideMaskRange (double min, double max)

void	showMaskAll ()

void	hideMaskAll ()

void	invertMask ()

void	growMask ()

void	shrinkMask ()

void	maskCircle (QRectF pt)

void	maskPolygon (QVector< QPointF > poly)

void	measurePolygon (QVector< QPointF > poly)

virtual void	slicePolygon (QVector< QPointF > poly)=0

void	printMeasuredPolygon (QVector< QPointF > poly)

void	summarizeMeasuredPolygon (QVector< QPointF > poly)

virtual void	integrateSaveAndDisplay ()=0

QString	pwd () const

QStringList	ls () const

QStringList	ls (QString pattern) const

void	loadData (QString name)

void	saveData (QString name, int canOverwrite=NoOverwrite)

void	saveData (QcepDataObjectPtr object, QString name, int canOverwrite=NoOverwrite)

void	loadDark (QString name)

void	saveDark (QString name, int canOverwrite=NoOverwrite)

void	loadMask (QString name)

void	saveMask (QString name, int canOverwrite=NoOverwrite)

void	loadBadPixels (QString name)

void	saveBadPixels (QString name, int canOverwrite=NoOverwrite)

void	loadGainMap (QString name)

void	saveGainMap (QString name, int canOverwrite=NoOverwrite)

void	saveCachedGeometry (QString name)

void	saveCachedIntensity (QString name)

void	clearDark ()

void	clearMask ()

void	clearBadPixels ()

void	clearGainMap ()

void	subtractDark ()

void	unsubtractDark ()

void	multiplyData (double scalar)

void	offsetData (double offset)

int	maskStackSize ()

int	maskStackPosition (int pos)

void	newMaskStack ()

void	pushMaskStack (QcepMaskDataPtr mask=QcepMaskDataPtr())

void	popMaskStack (int amount=1)

void	clearMaskStack ()

void	clearMaskStackTop ()

void	rollMaskStack (int amount)

void	exchangeMaskStack (int pos)

void	andMaskStack (int pos)

void	orMaskStack (int pos)

void	xorMaskStack (int pos)

void	andNotMaskStack (int pos)

void	orNotMaskStack (int pos)

void	xorNotMaskStack (int pos)

void	invertMaskStack (int pos)

void	growMaskStack (int pos)

void	shrinkMaskStack (int pos)

void	hideMaskAllStack (int pos)

void	showMaskAllStack (int pos)

void	hideMaskRangeStack (int pos)

void	showMaskRangeStack (int pos)

void	findZingers ()

void	newImage (int ncols, int nrows)

void	exponentialTail (double cx, double cy, double width, int oversample)

void	reciprocalTail (double cx, double cy, double strength, int oversample)

void	powderRing (double cx, double cy, double radius, double width, double strength, int oversample)

void	ellipse (double cx, double cy, double a, double e, double ang, double width, double strength, int oversample)

void	updateEstimatedProcessingTime ()

void	fileWriteTest (int dim, QString path)

int	status (double delay)

void	calculateROI ()

void	calculateHistogram ()

void	displayIntegratedData (QcepIntegratedDataPtr d)

void	writeOutputScan (QcepIntegratedDataPtr d)

void	newOutputScan (QString title)

void	appendToOutputScan (double x, double y)

void	plotOutputScan ()

void	saveOutputScan (QString fileName)

QStringList	integrateRectangle (int x0, int y0, int x1, int y1)

QString	existingOutputDirectory (QString dir, QString subdir) const

QString	filePathInExperimentDirectory (QString name) const

QString	filePathInDataDirectory (QString name) const

QString	filePathInDarkOutputDirectory (QString name) const

QString	filePathInRawOutputDirectory (QString name) const

QString	filePathInSubtractedOutputDirectory (QString name) const

QString	filePathInIntegratedOutputDirectory (QString name) const

QString	experimentDirectory () const

QString	dataDirectory () const

QString	darkOutputDirectory () const

QString	rawOutputDirectory () const

QString	subtractedOutputDirectory () const

QString	integratedOutputDirectory () const

QcepDoubleImageDataPtr	data () const

QcepDoubleImageDataPtr	darkImage () const

QcepDoubleImageDataPtr	gainMap () const

QcepDoubleImageDataPtr	badPixels () const

QcepDoubleImageDataPtr	liveData () const

QcepMaskDataPtr	mask () const

QcepMaskDataPtr	overflow () const

void	newData (QcepDoubleImageDataPtr image, QcepMaskDataPtr overflow)

Public Slots inherited from QcepObject
virtual void	printLine (QString line)

virtual void	printMessage (QString msg, QDateTime dt=QDateTime::currentDateTime()) const

virtual void	criticalMessage (QString msg, QDateTime ts=QDateTime::currentDateTime()) const

virtual void	statusMessage (QString msg, QDateTime ts=QDateTime::currentDateTime()) const

virtual QString	settingsScript ()

QString	scriptValueLiteral (QVariant v)

Signals
void	newIntegrationAvailable (QcepIntegratedDataPtr data)

Public Member Functions
	QxrdDataProcessorBase (QcepSettingsSaverWPtr saver, QxrdExperimentWPtr doc, QxrdAcquisitionWPtr acq, QxrdFileSaverWPtr filesaver)

virtual	~QxrdDataProcessorBase ()

void	loadDefaultImages ()

QcepDoubleImageDataPtr	takeNextFreeImage (int width, int height)

void	readSettings (QSettings *settings, QString section)

void	writeSettings (QSettings *settings, QString section)

void	setAcquisition (QxrdAcquisitionWPtr acq)

void	setWindow (QxrdWindowWPtr win)

void	createMaskIfNeeded ()

QxrdMaskStackPtr	maskStack ()

QxrdExperimentPtr	experiment () const

QxrdCenterFinderPtr	centerFinder () const

QxrdIntegratorPtr	integrator () const

QxrdPolarTransformPtr	polarTransform () const

QxrdPolarNormalizationPtr	polarNormalization () const

QxrdGenerateTestImageWPtr	generateTestImage () const

QxrdDistortionCorrectionPtr	distortionCorrection () const

void	newMask ()

void	updateEstimatedTime (QcepDoubleProperty *prop, int msec)

Public Member Functions inherited from QcepObject
	QcepObject (QString name, QcepObject *parent)

virtual	~QcepObject ()

QString	get_Name () const

void	set_Name (QString name)

Public Attributes
enum QxrdDataProcessorBase:: { ... }	ZingerConstants

Protected Member Functions
void	saveNamedImageData (QString name, QcepDoubleImageDataPtr image, QcepMaskDataPtr overflow, int canOverwrite=NoOverwrite)

void	saveNamedImageData (QString name, QcepInt16ImageDataPtr image, QcepMaskDataPtr overflow, int canOverwrite=NoOverwrite)

void	saveNamedImageData (QString name, QcepInt32ImageDataPtr image, QcepMaskDataPtr overflow, int canOverwrite=NoOverwrite)

void	saveNamedRawImageData (QString name, QcepInt16ImageDataPtr image, QcepMaskDataPtr overflow, int canOverwrite=NoOverwrite)

void	saveNamedRawImageData (QString name, QcepInt32ImageDataPtr image, QcepMaskDataPtr overflow, int canOverwrite=NoOverwrite)

void	saveNamedMaskData (QString name, QcepMaskDataPtr mask, int canOverwrite=NoOverwrite)

void	saveNamedImageDataAsText (QString name, QcepDoubleImageDataPtr image, QcepMaskDataPtr overflow, int canOverwrite=NoOverwrite)

void	writeOutputScan (QVector< double > x, QVector< double > y)

QcepDoubleImageDataPtr	processAcquiredInt16Image (QcepDoubleImageDataPtr processed, QcepInt16ImageDataPtr image, QcepDoubleImageDataPtr dark, QcepMaskDataPtr mask, QcepMaskDataPtr overflow)

QcepDoubleImageDataPtr	processAcquiredInt32Image (QcepDoubleImageDataPtr processed, QcepInt32ImageDataPtr image, QcepDoubleImageDataPtr dark, QcepMaskDataPtr mask, QcepMaskDataPtr overflow)

QcepDoubleImageDataPtr	processAcquiredDoubleImage (QcepDoubleImageDataPtr processed, QcepDoubleImageDataPtr image, QcepDoubleImageDataPtr dark, QcepMaskDataPtr mask, QcepMaskDataPtr overflow)

QcepDoubleImageDataPtr	processAcquiredDoubleImage (QcepDoubleImageDataPtr processed, QcepDoubleImageDataPtr image, QcepDoubleImageDataPtr dark, QcepMaskDataPtr mask, QcepMaskDataPtr overflow, QcepDoubleList v)

QcepDoubleImageDataPtr	processAcquiredImage (QcepDoubleImageDataPtr processed, QcepDoubleImageDataPtr dimg, QcepDoubleImageDataPtr dark, QcepMaskDataPtr mask, QcepMaskDataPtr overflow, QcepDoubleList v=QcepDoubleList())

void	newDarkImage (QcepInt16ImageDataPtr image)

void	newDarkImage (QcepInt32ImageDataPtr image)

double	estimatedProcessingTime (double estSerTime, double estParallelTime)

void	newDarkImage (QcepDoubleImageDataPtr image)

void	newBadPixelsImage (QcepDoubleImageDataPtr image)

void	newGainMapImage (QcepDoubleImageDataPtr image)

int	newMaskWidth () const

int	newMaskHeight () const

int	incrementAcquiredCount ()

int	decrementAcquiredCount ()

int	getAcquiredCount ()

void	subtractDarkImage (QcepDoubleImageDataPtr image, QcepDoubleImageDataPtr dark)

void	unsubtractDarkImage (QcepDoubleImageDataPtr image, QcepDoubleImageDataPtr dark)

void	correctBadPixels (QcepDoubleImageDataPtr image)

void	correctImageGains (QcepDoubleImageDataPtr image)

void	performImageCorrections (QcepDoubleImageDataPtr image)

Protected Attributes
QxrdExperimentWPtr	m_Experiment

QcepSettingsSaverWPtr	m_Saver

QxrdWindowWPtr	m_Window

QxrdFileSaverWPtr	m_FileSaver

QxrdAcquisitionWPtr	m_Acquisition

QWaitCondition	m_ProcessWaiting

QcepInt16ImageQueue	m_AcquiredInt16Images

QcepInt32ImageQueue	m_AcquiredInt32Images

QcepDoubleImageDataPtr	m_Data

QcepDoubleImageDataPtr	m_DarkFrame

QcepDoubleImageDataPtr	m_BadPixels

QcepDoubleImageDataPtr	m_GainMap

QcepDoubleImageDataPtr	m_LiveData

QcepMaskDataPtr	m_Overflow

QxrdMaskStack	m_Masks

QAtomicInt	m_AcquiredCount

QxrdCenterFinderPtr	m_CenterFinder

QxrdIntegratorPtr	m_Integrator

QxrdPolarTransformPtr	m_PolarTransform

QxrdPolarNormalizationPtr	m_PolarNormalization

QxrdGenerateTestImagePtr	m_GenerateTestImage

QcepIntegratedDataPtr	m_OutputScan

QxrdDistortionCorrectionPtr	m_DistortionCorrection

Properties
QString	fileName

QString	dataPath

QString	darkImagePath

QString	badPixelsPath

QString	gainMapPath

QString	maskPath

QString	scriptPath

bool	performDarkSubtraction

bool	saveRawImages

bool	saveDarkImages

bool	performBadPixels

bool	performGainCorrection

bool	saveSubtracted

bool	saveAsText

QString	saveAsTextSeparator

int	saveAsTextPerLine

bool	saveOverflowFiles

bool	performIntegration

bool	displayIntegratedData

bool	saveIntegratedData

QString	saveIntegratedPath

bool	saveDarkInSubdirectory

QString	saveDarkSubdirectory

bool	saveRawInSubdirectory

QString	saveRawSubdirectory

bool	saveSubtractedInSubdirectory

QString	saveSubtractedSubdirectory

bool	saveIntegratedInSeparateFiles

bool	saveIntegratedInSubdirectory

QString	saveIntegratedSubdirectory

bool	accumulateIntegrated2D

QString	accumulateIntegratedName

QString	accumulateIntegratedDirectory

QString	accumulateIntegratedFileName

QString	accumulateIntegratedFormat

double	performDarkSubtractionTime

double	performBadPixelsTime

double	performGainCorrectionTime

double	saveSubtractedTime

double	saveAsTextTime

double	performIntegrationTime

double	displayIntegratedDataTime

double	saveIntegratedDataTime

double	estimatedProcessingTime

double	averagingRatio

double	maskMinimumValue

double	maskMaximumValue

double	maskCircleRadius

bool	maskSetPixels

double	average

double	averageDark

double	averageRaw

int	correctionQueueLength

int	integrationQueueLength

int	saverQueueLength

int	zingerAlgorithm

int	zingerMask

int	zingerDestination

int	zingerSize1

int	zingerSize2

double	zingerThreshold

Properties inherited from QcepObject
QString	name

Private Attributes
QMutex	m_Mutex

Additional Inherited Members
Static Public Member Functions inherited from QcepObject
static int	allocatedObjects ()

static int	deletedObjects ()

static QSet< QcepObject * >	allocatedObjectsSet ()

static QString	addSlashes (QString str)

Detailed Description

Definition at line 37 of file qxrddataprocessorbase.h.

Member Enumeration Documentation

anonymous enum

Enumerator
NoOverwrite
CanOverwrite

Definition at line 242 of file qxrddataprocessorbase.h.

        {
     NoOverwrite,
     CanOverwrite
   };

anonymous enum

Enumerator
ZingerNoMask
ZingerDataMask
ZingerTopStack

Definition at line 377 of file qxrddataprocessorbase.h.

        {
     ZingerNoMask = -2,
     ZingerDataMask = -1,
     ZingerTopStack = -1
   } ZingerConstants;

Constructor & Destructor Documentation

QxrdDataProcessorBase::QxrdDataProcessorBase	(	QcepSettingsSaverWPtr	saver,
		QxrdExperimentWPtr	doc,
		QxrdAcquisitionWPtr	acq,
		QxrdFileSaverWPtr	filesaver
	)

Definition at line 26 of file qxrddataprocessorbase.cpp.

References DEBUG_APP, DEBUG_CONSTRUCTORS, m_CenterFinder, m_DistortionCorrection, m_Experiment, m_GenerateTestImage, m_Integrator, m_PolarNormalization, m_PolarTransform, printMessage(), and qcepDebug().

                                  :
 
   QcepObject("processor", NULL),
 //  m_OutputDirectory(saver, this,"outputDirectory", ""),
   m_FileName(QcepSettingsSaverPtr(), this, "fileName","", "Current File Name"),
   m_DataPath(saver, this,"dataPath", "", "Data Path"),
   m_DarkImagePath(saver, this, "darkImagePath", "", "Dark Images Path"),
   m_BadPixelsPath(saver, this, "badPixelsPath", "", "Bad Pixels Path"),
   m_GainMapPath(saver, this, "gainMapPath", "", "Gain Map Path"),
   m_MaskPath(saver, this, "maskPath", "", "Mask Path"),
   m_ScriptPath(saver, this, "scriptPath", "", "Script Path"),
   m_PerformDarkSubtraction(saver, this, "performDarkSubtraction", true, "Perform Dark Subtraction?"),
   m_SaveRawImages(saver, this, "saveRawImages", true, "Save Raw Images?"),
   m_SaveDarkImages(saver, this, "saveDarkImages", true, "Save Dark Images?"),
   m_PerformBadPixels(saver, this, "performBadPixels", true, "Perform Bad Pixel Correction?"),
   m_PerformGainCorrection(saver, this, "performGainCorrection", true, "Perform Gain Correction?"),
   m_SaveSubtracted(saver, this, "saveSubtracted", true, "Save Dark Subtracted Data?"),
   m_SaveAsText(saver, this, "saveAsText", false, "Save as Text Files (warning - Large and Slow!)"),
   m_SaveAsTextSeparator(saver, this, "saveAsTextSeparator", " ", "Separator for Images Saved as Text"),
   m_SaveAsTextPerLine(saver, this,"saveAsTextPerLine",16, "Pixels per line in Images Saved as Text"),
   m_SaveOverflowFiles(saver, this,"saveOverflowFiles",0, "Save Overflow Pixel Files?"),
   m_PerformIntegration(saver, this, "performIntegration", true, "Perform Circular Integration?"),
   m_DisplayIntegratedData(saver, this, "displayIntegratedData", true, "Display Integrated Data?"),
   m_SaveIntegratedData(saver, this, "saveIntegratedData", true, "Save Integrated Data?"),
   m_SaveIntegratedPath(saver, this, "saveIntegratedPath", "", "Integrated Data Path"),
   m_SaveDarkInSubdirectory(saver, this,"saveDarkInSubdirectory",0, "Save Dark In Subdirectory?"),
   m_SaveDarkSubdirectory(saver, this,"saveDarkSubdirectory","", "Dark Subdirectory"),
   m_SaveRawInSubdirectory(saver, this,"saveRawInSubdirectory",0, "Save Raw in Subdirectory?"),
   m_SaveRawSubdirectory(saver, this,"saveRawSubdirectory","", "Raw Subdirectory"),
   m_SaveSubtractedInSubdirectory(saver, this,"saveSubtractedInSubdirectory",0, "Save Subtracted in Subdirectory?"),
   m_SaveSubtractedSubdirectory(saver, this,"saveSubtractedSubdirectory","", "Subtracted Subdirectory"),
   m_SaveIntegratedInSeparateFiles(saver, this,"saveIntegratedInSeparateFiles",0, "Save Integrated in Separate Files?"),
   m_SaveIntegratedInSubdirectory(saver, this,"saveIntegratedInSubdirectory",0, "Save Integrated in Subdirectory?"),
   m_SaveIntegratedSubdirectory(saver, this,"saveIntegratedSubdirectory","", "Integrated Subdirectory"),
   m_AccumulateIntegrated2D(saver, this, "accumulateIntegrated2D", 0, "Accumulate integrated data in 2-d dataset"),
   m_AccumulateIntegratedName(saver, this, "accumulateIntegratedName", "/accumulated/2d-data", "Dataset to accumulate to"),
   m_AccumulateIntegratedDirectory(saver, this, "accumulateIntegratedDirectory", "", "Accumulator save directory"),
   m_AccumulateIntegratedFileName(saver, this, "accumulateIntegratedFileName", "", "Accumulator save file"),
   m_AccumulateIntegratedFormat(saver, this, "accumulateIntegratedFormat", "", "Accumulator save format"),
   m_PerformDarkSubtractionTime(saver, this, "performDarkSubtractionTime", 0.01, "Avg Time to Perform Dark Subtraction (in sec)"),
   m_PerformBadPixelsTime(saver, this, "performBadPixelsTime", 0.01, "Avg Time to Perform Bad Pixel Correction (in sec)"),
   m_PerformGainCorrectionTime(saver, this, "performGainCorrectionTime", 0.01, "Avg Time to Perform Gain Correction (in sec)"),
   m_SaveSubtractedTime(saver, this, "saveSubtractedTime", 0.1, "Avg Time to Save Subtracted Data (in sec)"),
   m_SaveAsTextTime(saver, this, "saveAsTextTime", 0.1, "Avg Time to Save Images as Text (in sec)"),
   m_PerformIntegrationTime(saver, this, "performIntegrationTime", 0.05, "Avg Time to Perform Integration (in sec/core)"),
   m_DisplayIntegratedDataTime(saver, this, "displayIntegratedDataTime", 0.2, "Avg Time to Display Integrated Data (in sec)"),
   m_SaveIntegratedDataTime(saver, this, "saveIntegratedDataTime", 0.01, "Avg Time to Save Integrated Data (in sec)"),
   m_EstimatedProcessingTime(saver, this, "estimatedProcessingTime", 0.1, "Overall Estimated Processing Time (in sec/image)"),
   m_AveragingRatio(saver, this, "averagingRatio", 0.1, "Averaging Ratio for Estimated Timing"),
   m_MaskMinimumValue(saver, this, "maskMinimumValue", 0, "Mask Minimum Value"),
   m_MaskMaximumValue(saver, this, "maskMaximumValue", 20000, "Mask Maximum Value"),
   m_MaskCircleRadius(saver, this, "maskCircleRadius", 10, "Mask Circle Radius"),
   m_MaskSetPixels(saver, this, "maskSetPixels", true, "Mask Set Pixels"),
 //  m_CompressImages(saver, this, "compressImages", false, "Compress Images"),
   m_Average(QcepSettingsSaverPtr(), this,"average",0.0, "Average Value of Acquired Image (per exposure)"),
   m_AverageDark(QcepSettingsSaverPtr(), this,"averageDark",0.0, "Average Value of Dark Image"),
   m_AverageRaw(QcepSettingsSaverPtr(), this,"averageRaw",0.0, "Average Value of Raw Image"),
   m_CorrectionQueueLength(QcepSettingsSaverPtr(), this, "correctionQueueLength", 0, "Image correction backlog"),
   m_IntegrationQueueLength(QcepSettingsSaverPtr(), this, "integrationQueueLength", 0, "Image integration backlog"),
   m_SaverQueueLength(QcepSettingsSaverPtr(), this, "saverQueueLength", 0, "Data saving backlog"),
   m_ZingerAlgorithm(saver, this, "zingerAlgorithm", 0, "Zinger Detection Algorithm"),
   m_ZingerMask(saver, this, "zingerMask", 0, "Zinger Mask Source"),
   m_ZingerDestination(saver, this, "zingerDestination", -1, "Zinger Destination"),
   m_ZingerSize1(saver, this, "zingerSize1", 1, "Inner Zinger Search Box Size"),
   m_ZingerSize2(saver, this, "zingerSize2", 5, "Outer Zinger Search Box Size"),
   m_ZingerThreshold(saver, this, "zingerThreshold", 2.5, "Zinger Detection Threshold"),
   m_Mutex(QMutex::Recursive),
   m_Experiment(doc),
   m_Saver(saver),
   m_Window(),
   m_FileSaver(filesaver),
   m_Acquisition(acq),
   m_AcquiredInt16Images("acquiredInt16Images"),
   m_AcquiredInt32Images("acquiredInt32Images"),
   m_Data(QcepAllocator::newDoubleImage(QcepAllocator::WaitTillAvailable, 2048, 2048, this)),
   m_DarkFrame(NULL),
   m_BadPixels(NULL),
   m_GainMap(NULL),
   //    m_Mask(allocator -> newMask()),
   m_AcquiredCount(0),
   m_CenterFinder(NULL),
   m_Integrator(NULL),
   m_PolarTransform(NULL),
   m_PolarNormalization(NULL),
   m_GenerateTestImage(NULL)
 {
 //  m_SaverQueueLength.setDebug(1);
 //  m_IntegrationQueueLength.setDebug(1);
 //  m_CorrectionQueueLength.setDebug(1);
 
   if (qcepDebug(DEBUG_CONSTRUCTORS)) {
     printf("QxrdDataProcessorBase::QxrdDataProcessorBase(%p)\n", this);
   }
 
   if (qcepDebug(DEBUG_APP)) {
     printMessage("QxrdDataProcessorBase::QxrdDataProcessorBase");
   }
 
   m_CenterFinder = QxrdCenterFinderPtr(new QxrdCenterFinder(saver, m_Experiment));
   m_Integrator   = QxrdIntegratorPtr(new QxrdIntegrator(saver, m_Experiment, m_CenterFinder));
   m_PolarTransform = QxrdPolarTransformPtr(new QxrdPolarTransform(saver, m_Experiment));
   m_PolarNormalization = QxrdPolarNormalizationPtr(new QxrdPolarNormalization(saver, m_Experiment));
 
 //  m_Integrator->initialize(m_Integrator);
 
   m_GenerateTestImage = QxrdGenerateTestImagePtr(new QxrdGenerateTestImage(saver));
 
   m_DistortionCorrection = QxrdDistortionCorrectionPtr(new QxrdDistortionCorrection(saver, m_Experiment));
 
 }

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QxrdDataProcessorBase::~QxrdDataProcessorBase ( )

virtual

Definition at line 141 of file qxrddataprocessorbase.cpp.

References DEBUG_CONSTRUCTORS, and qcepDebug().

 {
 #ifndef QT_NO_DEBUG
   printf("Deleting processor\n");
 #endif
 
   if (qcepDebug(DEBUG_CONSTRUCTORS)) {
     printf("QxrdDataProcessorBase::~QxrdDataProcessorBase(%p)\n", this);
   }
 }

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Member Function Documentation

void QxrdDataProcessorBase::andMaskStack ( int pos )

slot

Definition at line 922 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0)) {
     QcepMaskDataPtr pm = m_Masks[p1];
 
     m_Masks[p0] -> andMask(pm);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::andNotMaskStack ( int pos )

slot

Definition at line 970 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0)) {
     QcepMaskDataPtr pm = m_Masks[p1];
 
     m_Masks[p0] -> andNotMask(pm);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::appendToOutputScan	(	double	x,
		double	y
	)

slot

Definition at line 2228 of file qxrddataprocessorbase.cpp.

References m_OutputScan.

 {
   if (m_OutputScan) {
     m_OutputScan->append(x,y);
   }
 }

QcepDoubleImageDataPtr QxrdDataProcessorBase::badPixels ( ) const

slot

Definition at line 1841 of file qxrddataprocessorbase.cpp.

References m_BadPixels.

 {
   return m_BadPixels;
 }

void QxrdDataProcessorBase::calculateHistogram ( )

slot

Definition at line 2178 of file qxrddataprocessorbase.cpp.

References data(), m_Data, mask(), and printMessage().

Referenced by QxrdWindow::initialize(), and QxrdDataProcessorThreaded::onCorrectedImageAvailable().

 {
   QTime tic;
   tic.start();
 
   if (m_Data && mask()) {
     double *res = new double[65536];
     long npixels = m_Data -> get_Height() * m_Data -> get_Width();
     double *data = m_Data -> data();
     short  *maskp = mask() -> data();
 
     double minVal = *data;
     double maxVal = minVal;
 
     for (long i=0; i<npixels; i++) {
       double v = data[i];
       if (v < minVal) minVal = v;
       if (v > maxVal) maxVal = v;
     }
 
     for (int i=0; i<65536; i++) {
       res[i] = 0;
     }
 
     for (long i=0; i<npixels; i++) {
       double v = data[i];
       short bin = maskp[i];
       res[bin] += v;
     }
 
     int dt = tic.restart();
 
     printMessage(tr("Histogram calculated in %1 msec").arg(dt));
 
     delete [] res;
   }
 }

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void QxrdDataProcessorBase::calculateROI ( )

slot

Definition at line 2148 of file qxrddataprocessorbase.cpp.

References data(), m_Data, mask(), and printMessage().

Referenced by QxrdWindow::initialize(), and QxrdDataProcessorThreaded::onCorrectedImageAvailable().

 {
   QTime tic;
   tic.start();
 
   if (m_Data && mask()) {
     double *res = new double[65536];
     long npixels = (m_Data -> get_Height()) * (m_Data -> get_Width());
     double *data = m_Data -> data();
     short  *maskp = mask() -> data();
 
     for (int i=0; i<65536; i++) {
       res[i] = 0;
     }
 
     for (long i=0; i<npixels; i++) {
       double v = data[i];
       short bin = maskp[i];
       bin &= 255;
       res[bin] += v;
     }
 
     int dt = tic.restart();
 
     printMessage(tr("ROI calculated in %1 msec").arg(dt));
 
     delete [] res;
   }
 }

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QxrdCenterFinderPtr QxrdDataProcessorBase::centerFinder ( ) const

Definition at line 1918 of file qxrddataprocessorbase.cpp.

References m_CenterFinder, and printMessage().

Referenced by QxrdDataProcessorThreaded::fitPeakNear(), QxrdDataProcessorThreaded::integrateData(), and QxrdDataProcessorThreaded::onCorrectedImageAvailable().

 {
   if (m_CenterFinder == NULL) {
     printMessage("Problem QxrdDataProcessorBase::centerFinder == NULL");
   }
 
   return m_CenterFinder;
 }

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void QxrdDataProcessorBase::clearBadPixels ( )

slot

Definition at line 1234 of file qxrddataprocessorbase.cpp.

References newBadPixelsImage().

 {
   newBadPixelsImage(QcepDoubleImageDataPtr(NULL));
 
   set_BadPixelsPath("");
 }

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void QxrdDataProcessorBase::clearDark ( )

slot

Definition at line 1227 of file qxrddataprocessorbase.cpp.

References newDarkImage().

 {
   newDarkImage(QcepDoubleImageDataPtr(NULL));
 
   set_DarkImagePath("");
 }

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void QxrdDataProcessorBase::clearGainMap ( )

slot

Definition at line 1241 of file qxrddataprocessorbase.cpp.

References newGainMapImage().

 {
   newGainMapImage(QcepDoubleImageDataPtr(NULL));
 
   set_GainMapPath("");
 }

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void QxrdDataProcessorBase::clearMask ( )

slot

Definition at line 1157 of file qxrddataprocessorbase.cpp.

References clearMaskStack().

 {
   clearMaskStack();
 
   set_MaskPath("");
 }

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void QxrdDataProcessorBase::clearMaskStack ( )

slot

Definition at line 865 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, and newMask().

Referenced by clearMask().

 {
   m_Masks.clear();
 
   m_Masks.changed();
 
   newMask();
 }

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void QxrdDataProcessorBase::clearMaskStackTop ( )

slot

Definition at line 874 of file qxrddataprocessorbase.cpp.

References popMaskStack().

 {
   popMaskStack();
 }

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void QxrdDataProcessorBase::correctBadPixels ( QcepDoubleImageDataPtr image )

protected

Definition at line 1554 of file qxrddataprocessorbase.cpp.

Referenced by processAcquiredImage().

1555 {

1556 }

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void QxrdDataProcessorBase::correctImageGains ( QcepDoubleImageDataPtr image )

protected

Definition at line 1558 of file qxrddataprocessorbase.cpp.

References gainMap().

Referenced by processAcquiredImage().

 {
   if (image) {
     QcepDoubleImageDataPtr gains = gainMap();
 
     if (gains) {
       image -> multiply(gains);
     }
   }
 }

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void QxrdDataProcessorBase::createMaskIfNeeded ( )

Definition at line 1860 of file qxrddataprocessorbase.cpp.

References m_Masks, and newMaskStack().

Referenced by growMask(), hideMaskAll(), hideMaskRange(), maskCircle(), maskPolygon(), showMaskAll(), showMaskRange(), and shrinkMask().

 {
   if (m_Masks.isEmpty()) {
     newMaskStack();
   }
 }

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void QxrdDataProcessorBase::criticalMessage	(	QString	msg,
		QDateTime	ts = `QDateTime::currentDateTime()`
	)		const

slot

Definition at line 235 of file qxrddataprocessorbase.cpp.

References m_Experiment.

 {
   QxrdExperimentPtr exp(m_Experiment);
 
   if (exp) {
     exp->criticalMessage(msg, ts);
   }
 }

QcepDoubleImageDataPtr QxrdDataProcessorBase::darkImage ( ) const

slot

Definition at line 1831 of file qxrddataprocessorbase.cpp.

References m_DarkFrame.

Referenced by QxrdDataProcessorThreaded::acquiredDoubleImage(), QxrdDataProcessorThreaded::acquiredInt16Image(), QxrdDataProcessorThreaded::acquiredInt32Image(), QxrdDataProcessorThreaded::addImages(), QxrdDataProcessorThreaded::correlateImages(), QxrdDataProcessorThreaded::idleInt16Image(), loadData(), QxrdDataProcessorThreaded::projectImages(), QxrdDataProcessorThreaded::subtractImages(), and QxrdDataProcessorThreaded::sumImages().

 {
   return m_DarkFrame;
 }

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QString QxrdDataProcessorBase::darkOutputDirectory ( ) const

slot

Definition at line 295 of file qxrddataprocessorbase.cpp.

References dataDirectory(), and existingOutputDirectory().

Referenced by filePathInDarkOutputDirectory().

 {
   if (get_SaveDarkInSubdirectory()) {
     return existingOutputDirectory(dataDirectory(), get_SaveDarkSubdirectory());
   } else {
     return dataDirectory();
   }
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::data ( ) const

slot

Definition at line 1822 of file qxrddataprocessorbase.cpp.

References m_Data.

Referenced by QxrdDataProcessorThreaded::addImages(), calculateHistogram(), calculateROI(), QxrdDataProcessorThreaded::correlateImages(), QxrdDataProcessorThreaded::integrateSaveAndDisplay(), newMaskHeight(), newMaskWidth(), newOutputScan(), QxrdDataProcessorThreaded::reflectHorizontally(), QxrdDataProcessorThreaded::reflectVertically(), saveCachedGeometry(), saveCachedIntensity(), QxrdDataProcessorThreaded::shiftImage(), QxrdDataProcessorThreaded::slicePolygon(), QxrdDataProcessorThreaded::subtractImages(), and writeOutputScan().

 {
 //  if (qcepDebug(DEBUG_INTEGRATOR)) {
 //    printMessage(tr("processor.data() == %1").arg((long) m_Data.data()));
 //  }
 
   return m_Data;
 }

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QString QxrdDataProcessorBase::dataDirectory ( ) const

slot

Definition at line 279 of file qxrddataprocessorbase.cpp.

References m_Experiment.

Referenced by darkOutputDirectory(), filePathInDataDirectory(), QxrdDataProcessorThreaded::fixupBadBackgroundSubtraction(), integratedOutputDirectory(), ls(), pwd(), rawOutputDirectory(), and subtractedOutputDirectory().

 {
   QxrdExperimentPtr exp(m_Experiment);
 
   if (exp) {
     return QDir(exp->get_ExperimentDirectory()).filePath(exp->get_DataDirectory());
   } else {
     return QString();
   }
 }

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int QxrdDataProcessorBase::decrementAcquiredCount ( )

protected

Definition at line 1877 of file qxrddataprocessorbase.cpp.

References m_AcquiredCount, and m_ProcessWaiting.

 {
   int res = m_AcquiredCount.fetchAndAddOrdered(-1) - 1;
 
   if (res == 0) {
     m_ProcessWaiting.wakeAll();
   }
 
   return res;
 }

void QxrdDataProcessorBase::displayIntegratedData ( QcepIntegratedDataPtr d )

slot

Definition at line 2112 of file qxrddataprocessorbase.cpp.

References newIntegrationAvailable().

 {
   if (this->get_DisplayIntegratedData()) {
     emit newIntegrationAvailable(data);
   }
 }

QxrdDistortionCorrectionPtr QxrdDataProcessorBase::distortionCorrection ( ) const

Definition at line 1954 of file qxrddataprocessorbase.cpp.

References m_DistortionCorrection, and printMessage().

 {
   if (m_DistortionCorrection == NULL) {
     printMessage("Problem QxrdDataProcessorBase::distortion == NULL");
   }
 
   return m_DistortionCorrection;
 }

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void QxrdDataProcessorBase::ellipse	(	double	cx,
		double	cy,
		double	a,
		double	e,
		double	ang,
		double	width,
		double	strength,
		int	oversample
	)

slot

Definition at line 2058 of file qxrddataprocessorbase.cpp.

References m_Data, and newData().

 {
   int nr = m_Data -> get_Height();
   int nc = m_Data -> get_Width();
 
   for (int y=0; y<nr; y++) {
     for (int x=0; x<nc; x++) {
       double sum = 0;
 
       for (int iy = 0; iy < oversample; iy++) {
         double yy = (double) y + ((double) iy)/((double) oversample) - cy;
         double yy2 = yy*yy;
         for (int ix = 0; ix < oversample; ix++) {
           double xx = (double) x + ((double) ix)/((double) oversample) - cx;
           double xx2 = xx*xx;
           double r = sqrt(yy2 + xx2);
           double th = atan2(yy,xx);
           double elr = a*(1-e*e)/(1 - e*cos(th - ang));
           double ndr = (elr - r)/width;
 
           if (fabs(ndr) < 6) {
             double val = strength*exp(-2*ndr*ndr)/width*sqrt(2.0/M_PI);
             sum += val;
           }
         }
       }
 
       m_Data -> setValue(x, y, m_Data -> value(x,y) + sum/(oversample*oversample));
     }
   }
 
   newData(m_Data, QcepMaskDataPtr());
 }

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double QxrdDataProcessorBase::estimatedProcessingTime	(	double	estSerTime,
		double	estParallelTime
	)

protected

Definition at line 1618 of file qxrddataprocessorbase.cpp.

 {
   return estSerialTime + estParallelTime;
 }

void QxrdDataProcessorBase::exchangeMaskStack ( int pos )

slot

Definition at line 906 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0) && (p0 != p1)) {
     QcepMaskDataPtr pm=m_Masks[p0];
     m_Masks[p0] = m_Masks[p1];
     m_Masks[p1] = pm;
 
     m_Masks.changed();
 
     newMask();
   }
 }

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QString QxrdDataProcessorBase::existingOutputDirectory	(	QString	dir,
		QString	subdir
	)		const

slot

Definition at line 253 of file qxrddataprocessorbase.cpp.

Referenced by darkOutputDirectory(), integratedOutputDirectory(), rawOutputDirectory(), and subtractedOutputDirectory().

 {
   return QDir(dir).filePath(subdir);
 }

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QxrdExperimentPtr QxrdDataProcessorBase::experiment ( ) const

Definition at line 1909 of file qxrddataprocessorbase.cpp.

References m_Experiment, and printMessage().

 {
   if (m_Experiment == NULL) {
     printMessage("Problem: QxrdDataProcessorBase::experiment == NULL");
   }
 
   return m_Experiment;
 }

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QString QxrdDataProcessorBase::experimentDirectory ( ) const

slot

Definition at line 263 of file qxrddataprocessorbase.cpp.

References m_Experiment.

Referenced by filePathInExperimentDirectory().

 {
   QxrdExperimentPtr exp(m_Experiment);
 
   if (exp) {
     return exp->get_ExperimentDirectory();
   } else {
     return QString();
   }
 }

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void QxrdDataProcessorBase::exponentialTail	(	double	cx,
		double	cy,
		double	width,
		int	oversample
	)

slot

Definition at line 1971 of file qxrddataprocessorbase.cpp.

References m_Data, and newData().

 {
   int nr = m_Data -> get_Height();
   int nc = m_Data -> get_Width();
 
   for (int y=0; y<nr; y++) {
     for (int x=0; x<nc; x++) {
       double sum = 0;
 
       for (int iy = 0; iy < oversample; iy++) {
         double yy = (double) y + ((double) iy)/((double) oversample) - cy;
         double yy2 = yy*yy;
         for (int ix = 0; ix < oversample; ix++) {
           double xx = (double) x + ((double) ix)/((double) oversample) - cx;
           double xx2 = xx*xx;
           double r = sqrt(yy2 + xx2);
           sum += exp(-r/width);
         }
       }
 
       m_Data -> setValue(x, y, m_Data -> value(x,y) + sum/(oversample*oversample));
     }
   }
 
   newData(m_Data, QcepMaskDataPtr());
 }

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QString QxrdDataProcessorBase::filePathInDarkOutputDirectory ( QString name ) const

slot

Definition at line 290 of file qxrddataprocessorbase.cpp.

References darkOutputDirectory().

 {
   return QDir(darkOutputDirectory()).filePath(name);
 }

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QString QxrdDataProcessorBase::filePathInDataDirectory ( QString name ) const

slot

Definition at line 274 of file qxrddataprocessorbase.cpp.

References dataDirectory().

 {
   return QDir(dataDirectory()).filePath(name);
 }

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QString QxrdDataProcessorBase::filePathInExperimentDirectory ( QString name ) const

slot

Definition at line 258 of file qxrddataprocessorbase.cpp.

References experimentDirectory().

 {
   return QDir(experimentDirectory()).filePath(name);
 }

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QString QxrdDataProcessorBase::filePathInIntegratedOutputDirectory ( QString name ) const

slot

Definition at line 332 of file qxrddataprocessorbase.cpp.

References integratedOutputDirectory().

 {
   return QDir(integratedOutputDirectory()).filePath(name);
 }

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QString QxrdDataProcessorBase::filePathInRawOutputDirectory ( QString name ) const

slot

Definition at line 304 of file qxrddataprocessorbase.cpp.

References rawOutputDirectory().

 {
   return QDir(rawOutputDirectory()).filePath(name);
 }

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QString QxrdDataProcessorBase::filePathInSubtractedOutputDirectory ( QString name ) const

slot

Definition at line 318 of file qxrddataprocessorbase.cpp.

References subtractedOutputDirectory().

 {
   return QDir(subtractedOutputDirectory()).filePath(name);
 }

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void QxrdDataProcessorBase::fileWriteTest	(	int	dim,
		QString	path
	)

slot

Definition at line 2119 of file qxrddataprocessorbase.cpp.

References fileName, and printMessage().

 {
   long sz = dim*dim;
   quint32 *buff = new quint32[sz];
 
   QTime tic;
   tic.start();
   int totalt = 0;
 
   for (int i=0; i<10; i++) {
     QString fileName = path+tr("%1.junk").arg(i,5,10,QChar('0'));
 
     FILE *f = fopen(qPrintable(fileName), "w");
 
     if (f) {
       fwrite(buff, sz, sizeof(quint32), f);
       fclose(f);
 
       int dt = tic.restart();
       totalt += dt;
       printMessage(tr("file %1 written in %2 msec").arg(fileName).arg(dt));
     }
   }
 
   printMessage(tr("average write speed %1 MB/sec")
                     .arg(((double) sz)*40.0*1000.0/(1e6*((double) totalt))));
   delete [] buff;
 }

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void QxrdDataProcessorBase::findZingers ( )

slot

Definition at line 2339 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Data, m_Masks, mask(), maskStack(), QcepAllocator::newMask(), newMask(), pushMaskStack(), QcepAllocator::WaitTillAvailable, ZingerDataMask, and ZingerNoMask.

 {
   QcepMaskDataPtr  mask;
   QxrdMaskStackPtr masks = maskStack();
 
   if (get_ZingerMask() == ZingerNoMask) {
     mask = QcepMaskDataPtr();
   } else if (get_ZingerMask() == ZingerDataMask && m_Data) {
     mask = m_Data->mask();
   } else if (masks) {
     mask = masks->value(get_ZingerMask());
   }
 
   int wid = m_Data->get_Width();
   int ht  = m_Data->get_Height();
   int sz1 = get_ZingerSize1();
   int sz2 = get_ZingerSize2();
   double thr = get_ZingerThreshold();
 
   QcepMaskDataPtr dest
       = QcepAllocator::newMask(QcepAllocator::WaitTillAvailable, wid, ht, 1, this);
 
   for (int y=0; y<ht; y++) {
     for (int x=0; x<wid; x++) {
       if (mask==NULL || mask->value(x,y)) {
         double sum = 0, n = 0;
         double val = 0;
 
         for (int dy=-sz2; dy<=sz2; dy++) {
           for (int dx=-sz2; dx<=sz2; dx++) {
             if (mask==NULL || mask->value(x+dx, y+dy)) {
               if (dx == 0 && dy == 0) {
                 val = m_Data->value(x+dx, y+dy);
               } else {
                 sum += m_Data->value(x+dx, y+dy);
                 n   += 1;
               }
             }
           }
         }
 
         if (n > 0 && fabs(val-sum/n) >= thr) {
           dest->setValue(x,y,0);
         }
       }
     }
   }
 
   if (sz1 > 0) {
     for (int i=0; i<sz1; i++) {
       dest->growMask();
     }
   }
 
   if (mask) {
     for (int y=0; y<ht; y++) {
       for (int x=0; x<wid; x++) {
         if (mask->value(x,y) == 0) {
           dest->setValue(x,y,0);
         }
       }
     }
   }
 
   pushMaskStack(dest);
   m_Masks.changed();
   newMask();
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::gainMap ( ) const

slot

Definition at line 1836 of file qxrddataprocessorbase.cpp.

References m_GainMap.

Referenced by correctImageGains().

 {
   return m_GainMap;
 }

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QxrdGenerateTestImageWPtr QxrdDataProcessorBase::generateTestImage ( ) const

Definition at line 2216 of file qxrddataprocessorbase.cpp.

References m_GenerateTestImage.

 {
   return m_GenerateTestImage;
 }

int QxrdDataProcessorBase::getAcquiredCount ( )

protected

Definition at line 1888 of file qxrddataprocessorbase.cpp.

References m_AcquiredCount.

Referenced by processAcquiredImage(), processAcquiredInt16Image(), processAcquiredInt32Image(), and status().

 {
   return m_AcquiredCount.fetchAndAddOrdered(0);
 }

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void QxrdDataProcessorBase::growMask ( )

slot

Definition at line 1693 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), mask(), and newMask().

Referenced by growMaskStack().

 {
   createMaskIfNeeded();
 
   if (mask()) {
     mask() -> growMask();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::growMaskStack ( int pos )

slot

Definition at line 1031 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), growMask(), m_Masks, maskStackPosition(), and newMask().

 {
   int p = maskStackPosition(pos);
 
   if (p >= 0) {
     m_Masks[p] -> growMask();
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::hideMaskAll ( )

slot

Definition at line 1642 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), mask(), and newMask().

Referenced by hideMaskAllStack(), and QxrdWindow::initialize().

 {
   createMaskIfNeeded();
 
   if (mask()) {
     mask() -> hideMaskAll();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::hideMaskAllStack ( int pos )

slot

Definition at line 1057 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), hideMaskAll(), m_Masks, maskStackPosition(), and newMask().

 {
   int p = maskStackPosition(pos);
 
   if (p >= 0) {
     m_Masks[p] -> hideMaskAll();
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::hideMaskRange ( )

slot

Definition at line 1664 of file qxrddataprocessorbase.cpp.

Referenced by hideMaskRange(), hideMaskRangeStack(), and QxrdWindow::initialize().

 {
   double min = get_MaskMinimumValue();
   double max = get_MaskMaximumValue();
 
   hideMaskRange(min, max);
 }

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void QxrdDataProcessorBase::hideMaskRange	(	double	min,
		double	max
	)

slot

Definition at line 1672 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), hideMaskRange(), m_Data, mask(), and newMask().

 {
   createMaskIfNeeded();
 
 
   if (m_Data && mask()) {
     mask() -> hideMaskRange(QSharedPointer< QcepImageData<double> >(m_Data), min, max);
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::hideMaskRangeStack ( int pos )

slot

Definition at line 1083 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), hideMaskRange(), m_Data, m_Masks, maskStackPosition(), and newMask().

 {
   int p = maskStackPosition(pos);
 
   double min = get_MaskMinimumValue();
   double max = get_MaskMaximumValue();
 
   if (m_Data && p >= 0) {
     m_Masks[p] -> hideMaskRange(QSharedPointer< QcepImageData<double> >(m_Data), min, max);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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int QxrdDataProcessorBase::incrementAcquiredCount ( )

protected

Definition at line 1872 of file qxrddataprocessorbase.cpp.

References m_AcquiredCount.

 {
   return m_AcquiredCount.fetchAndAddOrdered(+1) + 1;
 }

QString QxrdDataProcessorBase::integratedOutputDirectory ( ) const

slot

Definition at line 337 of file qxrddataprocessorbase.cpp.

References dataDirectory(), and existingOutputDirectory().

Referenced by filePathInIntegratedOutputDirectory(), and writeOutputScan().

 {
   if (get_SaveIntegratedInSubdirectory()) {
     return existingOutputDirectory(dataDirectory(), get_SaveIntegratedSubdirectory());
   } else {
     return dataDirectory();
   }
 }

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QStringList QxrdDataProcessorBase::integrateRectangle	(	int	x0,
		int	y0,
		int	x1,
		int	y1
	)

slot

Definition at line 2249 of file qxrddataprocessorbase.cpp.

References m_Data, mask(), and printMessage().

 {
   double sum = 0;
   double npx = 0;
 
   QcepDoubleImageDataPtr dat = m_Data;
   QcepMaskDataPtr        msk = mask();
   QStringList            res;
 
   if (dat) {
     if (msk) {
       for (int y=y0; y<y1; y++) {
         for (int x=x0; x<x1; x++) {
           if (msk->value(x,y)) {
             sum += dat->value(x,y);
             npx += 1;
           }
         }
       }
     } else {
       for (int y=y0; y<y1; y++) {
         for (int x=x0; x<x1; x++) {
           sum += dat->value(x,y);
           npx += 1;
         }
       }
     }
 
     printMessage(tr("integrateRectange(\"%1\",%2,%3,%4,%5)=[%6,%7]=%8")
                  .arg(dat->get_FileName())
                  .arg(x0).arg(y0).arg(x1).arg(y1).arg(sum).arg(npx).arg(sum/npx));
 
     if (npx > 0) {
       res << tr("%1").arg(sum/npx);
     } else {
       res << "0";
     }
 
     res << tr("%1").arg(sum);
     res << tr("%1").arg(npx);
     res << dat->get_FileName();
   }
 
   return res;
 }

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virtual void QxrdDataProcessorBase::integrateSaveAndDisplay ( )

pure virtualslot

QxrdIntegratorPtr QxrdDataProcessorBase::integrator ( ) const

Definition at line 1927 of file qxrddataprocessorbase.cpp.

References m_Integrator, and printMessage().

 {
   if (m_Integrator == NULL) {
     printMessage("Problem QxrdDataProcessorBase::integrator == NULL");
   }
 
   return m_Integrator;
 }

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void QxrdDataProcessorBase::invertMask ( )

slot

Definition at line 1684 of file qxrddataprocessorbase.cpp.

References mask(), and newMask().

Referenced by QxrdWindow::initialize(), and invertMaskStack().

 {
   if (mask()) {
     mask() -> invertMask();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::invertMaskStack ( int pos )

slot

Definition at line 1018 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), invertMask(), m_Masks, maskStackPosition(), and newMask().

 {
   int p = maskStackPosition(pos);
 
   if (p >= 0) {
     m_Masks[p] -> invertMask();
 
     m_Masks.changed();
 
     newMask();
   }
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::liveData ( ) const

slot

Definition at line 1846 of file qxrddataprocessorbase.cpp.

References m_LiveData.

 {
   return m_LiveData;
 }

void QxrdDataProcessorBase::loadBadPixels ( QString name )

slot

Definition at line 655 of file qxrddataprocessorbase.cpp.

References QcepImageDataBase::BadPixelsData, DEBUG_FILES, filePathInDataDirectory(), newBadPixelsImage(), printMessage(), qcepDebug(), and takeNextFreeImage().

Referenced by loadDefaultImages().

 {
   if (qcepDebug(DEBUG_FILES)) {
     printMessage(tr("QxrdDataProcessorBase::loadBadPixels(%1)").arg(name));
   }
 
   QcepDoubleImageDataPtr res = takeNextFreeImage(0,0);
 
   QString path = filePathInDataDirectory(name);
 
   if (res && res -> readImage(path)) {
 
     //  printf("Read %d x %d image\n", res->get_Width(), res->get_Height());
 
     res -> loadMetaData();
     res -> set_DataType(QcepDoubleImageData::BadPixelsData);
 
     newBadPixelsImage(res);
 
     set_BadPixelsPath(res -> get_FileName());
   }
 }

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void QxrdDataProcessorBase::loadDark ( QString name )

slot

Definition at line 608 of file qxrddataprocessorbase.cpp.

References QcepImageDataBase::DarkData, DEBUG_FILES, filePathInDataDirectory(), INVOKE_CHECK, newDarkImage(), printMessage(), qcepDebug(), and takeNextFreeImage().

Referenced by loadDefaultImages().

 {
   if (QThread::currentThread() != thread()) {
     INVOKE_CHECK(QMetaObject::invokeMethod(this, "loadDark", Qt::BlockingQueuedConnection, Q_ARG(QString, name)))
   } else {
     if (qcepDebug(DEBUG_FILES)) {
       printMessage(
             tr("QxrdDataProcessorBase::loadDark(%1)").arg(name));
     }
 
     QcepDoubleImageDataPtr res = takeNextFreeImage(0,0);
 
     QString path = filePathInDataDirectory(name);
 
     if (res && res -> readImage(path)) {
 
       //  printf("Read %d x %d image\n", res->get_Width(), res->get_Height());
 
       res -> loadMetaData();
       res -> set_DataType(QcepDoubleImageData::DarkData);
 
       newDarkImage(res);
 
       set_DarkImagePath(res -> get_FileName());
 
       printMessage(tr("Loaded Dark Image from %1").arg(path));
     } else {
       printMessage(tr("loadDark(%1) failed").arg(name));
     }
   }
 }

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void QxrdDataProcessorBase::loadData ( QString name )

slot

Definition at line 524 of file qxrddataprocessorbase.cpp.

References darkImage(), DEBUG_FILES, filePathInDataDirectory(), INVOKE_CHECK, newData(), printMessage(), qcepDebug(), QcepImageDataBase::Raw16Data, QcepImageDataBase::Raw32Data, subtractDarkImage(), and takeNextFreeImage().

 {
   if (QThread::currentThread() != thread()) {
     INVOKE_CHECK(QMetaObject::invokeMethod(this, "loadData", Qt::BlockingQueuedConnection, Q_ARG(QString, name)))
   } else {
     if (qcepDebug(DEBUG_FILES)) {
       printMessage(
             tr("QxrdDataProcessorBase::loadData(%1)").arg(name));
     }
 
     QcepDoubleImageDataPtr res = takeNextFreeImage(0,0);
 
     QString path = filePathInDataDirectory(name);
 
     if (res && res -> readImage(path)) {
 
       //  printf("Read %d x %d image\n", res->get_Width(), res->get_Height());
 
       res -> loadMetaData();
 
       int typ = res->get_DataType();
 
       if ((typ == QcepDoubleImageData::Raw16Data) ||
           (typ == QcepDoubleImageData::Raw32Data))
       {
         subtractDarkImage(res, darkImage());
       }
 
       newData(res, QcepMaskDataPtr());
 
       set_DataPath(res -> get_FileName());
 
       printMessage(tr("Loaded data from %1").arg(path));
     }
   }
 }

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void QxrdDataProcessorBase::loadDefaultImages ( )

Definition at line 459 of file qxrddataprocessorbase.cpp.

References fileName, loadBadPixels(), loadDark(), loadGainMap(), and loadMask().

 {
   QString fileName = get_MaskPath();
   QFileInfo fileInfo(fileName);
 
   if (fileInfo.exists() && fileInfo.isFile()) {
     loadMask(fileName);
   }
 
   fileName = get_DarkImagePath();
   fileInfo.setFile(fileName);
 
   if (fileInfo.exists() && fileInfo.isFile()) {
     loadDark(fileName);
   }
 
   fileName = get_BadPixelsPath();
   fileInfo.setFile(fileName);
 
   if (fileInfo.exists() && fileInfo.isFile()) {
     loadBadPixels(fileName);
   }
 
   fileName = get_GainMapPath();
   fileInfo.setFile(fileName);
 
   if (fileInfo.exists() && fileInfo.isFile()) {
     loadGainMap(fileName);
   }
 }

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void QxrdDataProcessorBase::loadGainMap ( QString name )

slot

Definition at line 689 of file qxrddataprocessorbase.cpp.

References DEBUG_FILES, filePathInDataDirectory(), QcepImageDataBase::GainData, newGainMapImage(), printMessage(), qcepDebug(), and takeNextFreeImage().

Referenced by loadDefaultImages().

 {
   if (qcepDebug(DEBUG_FILES)) {
     printMessage(tr("QxrdDataProcessorBase::loadGainMap(%1)").arg(name));
   }
 
   QcepDoubleImageDataPtr res = takeNextFreeImage(0,0);
 
   QString path = filePathInDataDirectory(name);
 
   if (res -> readImage(path)) {
 
     //  printf("Read %d x %d image\n", res->get_Width(), res->get_Height());
 
     res -> loadMetaData();
     res -> set_DataType(QcepDoubleImageData::GainData);
     res -> setDefaultValue(1.0);
 
     newGainMapImage(res);
 
     set_GainMapPath(res -> get_FileName());
   }
 }

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void QxrdDataProcessorBase::loadMask ( QString name )

slot

Definition at line 1115 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), DEBUG_FILES, filePathInDataDirectory(), m_Masks, mask(), QcepImageDataBase::MaskData, QcepAllocator::newMask(), newMask(), printMessage(), pushMaskStack(), qcepDebug(), and QcepAllocator::WaitTillAvailable.

Referenced by loadDefaultImages().

 {
   if (qcepDebug(DEBUG_FILES)) {
     printMessage(tr("QxrdDataProcessorBase::loadMask(%1)").arg(name));
   }
 
   QcepMaskDataPtr res = QcepAllocator::newMask(QcepAllocator::WaitTillAvailable, 0,0, 0, this);
 
   QString path = filePathInDataDirectory(name);
 
   if (res -> readImage(path)) {
 
     //  printf("Read %d x %d image\n", res->get_Width(), res->get_Height());
 
     res -> loadMetaData();
     res -> set_DataType(QcepMaskData::MaskData);
 
     //    res -> copyMaskTo(m_Mask);
 
     pushMaskStack(res);
 
     m_Masks.changed();
 
     newMask();
 
     set_MaskPath(mask() -> get_FileName());
 
     printMessage(tr("Loaded Mask from %1").arg(path));
   }
 }

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QStringList QxrdDataProcessorBase::ls ( ) const

slot

Definition at line 504 of file qxrddataprocessorbase.cpp.

References dataDirectory().

 {
   QStringList res;
   QDir dir(dataDirectory());
 
   res = dir.entryList(QStringList());
 
   return res;
 }

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QStringList QxrdDataProcessorBase::ls ( QString pattern ) const

slot

Definition at line 514 of file qxrddataprocessorbase.cpp.

References dataDirectory().

 {
   QStringList res;
   QDir dir(dataDirectory());
 
   res = dir.entryList(QStringList(pattern));
 
   return res;
 }

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QcepMaskDataPtr QxrdDataProcessorBase::mask ( ) const

slot

Definition at line 1851 of file qxrddataprocessorbase.cpp.

References m_Masks.

 {
   if (m_Masks.isEmpty()) {
     return QcepMaskDataPtr();
   } else {
     return m_Masks.first();
   }
 }

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void QxrdDataProcessorBase::maskCircle ( QRectF pt )

slot

Definition at line 1715 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), mask(), and newMask().

Referenced by QxrdImagePlot::setProcessor().

 { 
   createMaskIfNeeded();
 
   if (mask()) {
     if ((rect.left() == rect.right()) && (rect.bottom() == rect.top())) {
       mask() -> maskCircle(rect.left(), rect.top(), get_MaskCircleRadius(), get_MaskSetPixels());
     } else {
       double cx = rect.center().x();
       double cy = rect.center().y();
       double rad = rect.width()/2;
 
       mask() -> maskCircle(cx, cy, rad, get_MaskSetPixels());
     }
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::maskPolygon ( QVector< QPointF > poly )

slot

Definition at line 1734 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), mask(), and newMask().

Referenced by QxrdImagePlot::setProcessor().

 {
   createMaskIfNeeded();
 
   if (mask()) {
     //  printf("QxrdDataProcessorBase::maskPolygon(%d points ...)\n", poly.size());
 
     int nRows = mask() -> get_Height();
     int nCols = mask() -> get_Width();
 
     QImage polyImage(nCols, nRows, QImage::Format_RGB32);
     QPainter polyPainter(&polyImage);
     QPolygonF polygon;
 
     foreach(QPointF pt, poly) {
       polygon.append(pt);
     }
 
     polyPainter.setPen(Qt::white);
     polyPainter.fillRect(0,0,nCols,nRows,Qt::black);
     polyPainter.setBrush(QBrush(Qt::white, Qt::SolidPattern));
     polyPainter.drawPolygon(poly);
 
     bool newval = get_MaskSetPixels();
 
     for (int j=0; j<nRows; j++) {
       for (int i=0; i<nCols; i++) {
         if (qGray(polyImage.pixel(i,j))) {
           mask() -> setMaskValue(i, j, newval);
         }
       }
     }
 
     newMask();
   }
 }

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QxrdMaskStackPtr QxrdDataProcessorBase::maskStack ( )

Definition at line 746 of file qxrddataprocessorbase.cpp.

References m_Masks.

Referenced by findZingers().

 {
   return &m_Masks;
 }

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int QxrdDataProcessorBase::maskStackPosition ( int pos )

slot

Definition at line 756 of file qxrddataprocessorbase.cpp.

References m_Masks.

Referenced by andMaskStack(), andNotMaskStack(), exchangeMaskStack(), growMaskStack(), hideMaskAllStack(), hideMaskRangeStack(), invertMaskStack(), orMaskStack(), orNotMaskStack(), showMaskAllStack(), showMaskRangeStack(), shrinkMaskStack(), xorMaskStack(), and xorNotMaskStack().

 {
   int len = m_Masks.count();
 
   if (pos >= 0 && pos < len) {
     return pos;
   } else if (pos < 0 && pos >= -len) {
     return len-pos;
   } else {
     return -1;
   }
 }

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int QxrdDataProcessorBase::maskStackSize ( )

slot

Definition at line 751 of file qxrddataprocessorbase.cpp.

References m_Masks.

 {
   return m_Masks.count();
 }

void QxrdDataProcessorBase::measurePolygon ( QVector< QPointF > poly )

slot

Definition at line 1771 of file qxrddataprocessorbase.cpp.

References m_Data, printMessage(), and summarizeMeasuredPolygon().

Referenced by QxrdImagePlot::setProcessor().

 {
   foreach(QPointF pt, poly) {
     printMessage(tr("Measure pt (%1,%2) = %3").arg(pt.x()).arg(pt.y())
                       .arg(m_Data -> value(pt.x(),pt.y())));
   }
 
   summarizeMeasuredPolygon(poly);
 }

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void QxrdDataProcessorBase::multiplyData ( double scalar )

slot

Definition at line 2311 of file qxrddataprocessorbase.cpp.

References m_Data.

 {
   QcepDoubleImageDataPtr dat = m_Data;
 
   int wid = dat->get_Width();
   int ht  = dat->get_Height();
 
   for (int y=0; y<ht; y++) {
     for (int x=0; x<wid; x++) {
       dat->setValue(x, y, dat->value(x, y) * scalar);
     }
   }
 }

void QxrdDataProcessorBase::newBadPixelsImage ( QcepDoubleImageDataPtr image )

protected

Definition at line 428 of file qxrddataprocessorbase.cpp.

References m_BadPixels.

Referenced by clearBadPixels(), and loadBadPixels().

 {
   m_BadPixels = image;
 
   if (image) {
     set_BadPixelsPath(image->get_FileName());
   } else {
     set_BadPixelsPath("");
   }
 }

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void QxrdDataProcessorBase::newDarkImage ( QcepInt16ImageDataPtr image )

protected

Definition at line 396 of file qxrddataprocessorbase.cpp.

References m_DarkFrame, and takeNextFreeImage().

Referenced by clearDark(), loadDark(), and newDarkImage().

 {
   if (image) {
     if (m_DarkFrame == NULL) {
       m_DarkFrame = takeNextFreeImage(image->get_Width(), image->get_Height());
     }
 
     m_DarkFrame -> copyFrom(image);
     newDarkImage(m_DarkFrame);
 
     // set_DarkImagePath(m_DarkFrame -> get_FileName());
   } else {
     newDarkImage(QcepDoubleImageDataPtr(NULL));
   }
 }

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void QxrdDataProcessorBase::newDarkImage ( QcepInt32ImageDataPtr image )

protected

Definition at line 412 of file qxrddataprocessorbase.cpp.

References m_DarkFrame, newDarkImage(), and takeNextFreeImage().

 {
   if (image) {
     if (m_DarkFrame == NULL) {
       m_DarkFrame = takeNextFreeImage(image->get_Width(), image->get_Height());
     }
 
     m_DarkFrame -> copyFrom(image);
     newDarkImage(m_DarkFrame);
 
     //  set_DarkImagePath(m_DarkFrame -> get_FileName());
   } else {
     newDarkImage(QcepDoubleImageDataPtr(NULL));
   }
 }

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void QxrdDataProcessorBase::newDarkImage ( QcepDoubleImageDataPtr image )

protected

Definition at line 370 of file qxrddataprocessorbase.cpp.

References m_DarkFrame.

 {
   m_DarkFrame = image;
 
   if (image) {
     set_DarkImagePath(image->get_FileName());
 
     int height = image->get_Height();
     int width  = image->get_Width();
     int ndrk = image -> get_SummedExposures();
     int npixels = width*height;
     if (ndrk <= 0) ndrk = 1;
 
     double *dk     = image->data();
     double avgdark = 0;
 
     for (int i=0; i<npixels; i++) {
       avgdark  += dk[i];
     }
     set_AverageDark(avgdark/npixels/ndrk);
   } else {
     set_DarkImagePath("");
     set_AverageDark(0);
   }
 }

void QxrdDataProcessorBase::newData	(	QcepDoubleImageDataPtr	image,
		QcepMaskDataPtr	overflow
	)

slot

Definition at line 354 of file qxrddataprocessorbase.cpp.

References m_CenterFinder, m_Data, m_Overflow, m_Window, and overflow().

Referenced by QxrdDataProcessorThreaded::addImages(), ellipse(), exponentialTail(), QxrdDataProcessorThreaded::idleInt16Image(), loadData(), newImage(), powderRing(), processAcquiredImage(), QxrdDataProcessorThreaded::projectImages(), reciprocalTail(), QxrdDataProcessorThreaded::reflectHorizontally(), QxrdDataProcessorThreaded::reflectVertically(), setWindow(), QxrdDataProcessorThreaded::shiftImage(), QxrdDataProcessorThreaded::subtractImages(), and QxrdDataProcessorThreaded::sumImages().

 {
   m_Data = image;
   m_Overflow = overflow;
 
   QxrdWindowPtr w = m_Window;
 
   if (w) {
     w -> newDataAvailable(m_Data, overflow);
   }
 
   if (m_CenterFinder) {
     m_CenterFinder->setData(m_Data);
   }
 }

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void QxrdDataProcessorBase::newGainMapImage ( QcepDoubleImageDataPtr image )

protected

Definition at line 439 of file qxrddataprocessorbase.cpp.

References m_GainMap.

Referenced by clearGainMap(), and loadGainMap().

 {
   m_GainMap = image;
 
   if (image) {
     set_GainMapPath(image->get_FileName());
   } else {
     set_GainMapPath("");
   }
 }

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void QxrdDataProcessorBase::newImage	(	int	ncols,
		int	nrows
	)

slot

Definition at line 1963 of file qxrddataprocessorbase.cpp.

References m_Data, and newData().

 {
   m_Data -> resize(ncols, nrows);
   m_Data -> fill(0);
 
   newData(m_Data, QcepMaskDataPtr());
 }

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void QxrdDataProcessorBase::newIntegrationAvailable ( QcepIntegratedDataPtr data )

signal

Referenced by displayIntegratedData(), QxrdWindow::initialize(), and plotOutputScan().

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void QxrdDataProcessorBase::newMask ( )

Definition at line 450 of file qxrddataprocessorbase.cpp.

References m_Window, and mask().

Referenced by andMaskStack(), andNotMaskStack(), clearMaskStack(), exchangeMaskStack(), findZingers(), growMask(), growMaskStack(), hideMaskAll(), hideMaskAllStack(), hideMaskRange(), hideMaskRangeStack(), invertMask(), invertMaskStack(), loadMask(), maskCircle(), maskPolygon(), newMaskStack(), orMaskStack(), orNotMaskStack(), popMaskStack(), pushMaskStack(), rollMaskStack(), setWindow(), showMaskAll(), showMaskAllStack(), showMaskRange(), showMaskRangeStack(), shrinkMask(), shrinkMaskStack(), xorMaskStack(), and xorNotMaskStack().

 {
   QxrdWindowPtr w = m_Window;
 
   if (w) {
     w -> newMaskAvailable(mask());
   }
 }

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int QxrdDataProcessorBase::newMaskHeight ( ) const

protected

Definition at line 784 of file qxrddataprocessorbase.cpp.

References data(), and mask().

Referenced by newMaskStack(), and pushMaskStack().

 {
   QcepDoubleImageDataPtr d = data();
 
   int h=0;
 
   if (d) {
     h = d->get_Height();
   } else if (mask()) {
     h = mask()->get_Height();
   }
 
   return h;
 }

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void QxrdDataProcessorBase::newMaskStack ( )

slot

Definition at line 799 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, QcepAllocator::newMask(), newMask(), newMaskHeight(), newMaskWidth(), printMessage(), and QcepAllocator::WaitTillAvailable.

Referenced by createMaskIfNeeded().

 {
 
   QcepMaskDataPtr m = QcepAllocator::newMask(QcepAllocator::WaitTillAvailable,
                                              newMaskWidth(), newMaskHeight(), 0, this);
 
   m_Masks.push_front(m);
 
   printMessage(tr("new mask, %1 on stack").arg(m_Masks.count()));
 
   m_Masks.changed();
 
   newMask();
 }

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int QxrdDataProcessorBase::newMaskWidth ( ) const

protected

Definition at line 769 of file qxrddataprocessorbase.cpp.

References data(), and mask().

Referenced by newMaskStack(), and pushMaskStack().

 {
   QcepDoubleImageDataPtr d = data();
 
   int w=0;
 
   if (d) {
     w = d->get_Width();
   } else if (mask()) {
     w = mask()->get_Width();
   }
 
   return w;
 }

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void QxrdDataProcessorBase::newOutputScan ( QString title )

slot

Definition at line 2221 of file qxrddataprocessorbase.cpp.

References QcepAllocator::AlwaysAllocate, data(), m_OutputScan, and QcepAllocator::newIntegratedData().

 {
   m_OutputScan = QcepAllocator::newIntegratedData(QcepAllocator::AlwaysAllocate, data(), this);
 
   m_OutputScan -> set_Title(title);
 }

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void QxrdDataProcessorBase::offsetData ( double offset )

slot

Definition at line 2325 of file qxrddataprocessorbase.cpp.

References m_Data.

 {
   QcepDoubleImageDataPtr dat = m_Data;
 
   int wid = dat->get_Width();
   int ht  = dat->get_Height();
 
   for (int y=0; y<ht; y++) {
     for (int x=0; x<wid; x++) {
       dat->setValue(x, y, dat->value(x, y) + offset);
     }
   }
 }

void QxrdDataProcessorBase::orMaskStack ( int pos )

slot

Definition at line 938 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0)) {
     QcepMaskDataPtr pm = m_Masks[p1];
 
     m_Masks[p0] -> orMask(pm);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::orNotMaskStack ( int pos )

slot

Definition at line 986 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0)) {
     QcepMaskDataPtr pm = m_Masks[p1];
 
     m_Masks[p0] -> orNotMask(pm);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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QcepMaskDataPtr QxrdDataProcessorBase::overflow ( ) const

slot

Definition at line 1867 of file qxrddataprocessorbase.cpp.

References m_Overflow.

Referenced by newData(), processAcquiredImage(), processAcquiredInt16Image(), and processAcquiredInt32Image().

 {
   return m_Overflow;
 }

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void QxrdDataProcessorBase::performImageCorrections ( QcepDoubleImageDataPtr image )

protected

void QxrdDataProcessorBase::plotOutputScan ( )

slot

Definition at line 2235 of file qxrddataprocessorbase.cpp.

References m_OutputScan, and newIntegrationAvailable().

 {
   if (m_OutputScan) {
     emit newIntegrationAvailable(m_OutputScan);
   }
 }

QxrdPolarNormalizationPtr QxrdDataProcessorBase::polarNormalization ( ) const

Definition at line 1945 of file qxrddataprocessorbase.cpp.

References m_PolarNormalization, and printMessage().

 {
   if (m_PolarNormalization == NULL) {
     printMessage("Problem QxrdDataProcessorBase::polarNormalization == NULL");
   }
 
   return m_PolarNormalization;
 }

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QxrdPolarTransformPtr QxrdDataProcessorBase::polarTransform ( ) const

Definition at line 1936 of file qxrddataprocessorbase.cpp.

References m_PolarTransform, and printMessage().

 {
   if (m_PolarTransform == NULL) {
     printMessage("Problem QxrdDataProcessorBase::polarTransform == NULL");
   }
 
   return m_PolarTransform;
 }

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void QxrdDataProcessorBase::popMaskStack ( int amount = 1 )

slot

Definition at line 836 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, and newMask().

Referenced by clearMaskStackTop().

 {
   if (amount == 0) {
     return;
   } else if (amount > 1) {
     for (int i=0; i<amount; i++) {
       popMaskStack(1);
     }
   } else if (amount < -1) {
     for (int i=0; i<(-amount); i++) {
       popMaskStack(-1);
     }
   } else if (amount == 1) {
     if (m_Masks.count() >= 1) {
 //      m_Mask = m_Masks.first();
       m_Masks.pop_front();
     }
   } else if (amount == -1) {
     if (m_Masks.count() >= 1) {
 //      m_Mask = m_Masks.last();
       m_Masks.pop_back();
     }
   }
 
   m_Masks.changed();
 
   newMask();
 }

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void QxrdDataProcessorBase::powderRing	(	double	cx,
		double	cy,
		double	radius,
		double	width,
		double	strength,
		int	oversample
	)

slot

Definition at line 2025 of file qxrddataprocessorbase.cpp.

References m_Data, and newData().

 {
   int nr = m_Data -> get_Height();
   int nc = m_Data -> get_Width();
 
   for (int y=0; y<nr; y++) {
     for (int x=0; x<nc; x++) {
       double sum = 0;
 
       for (int iy = 0; iy < oversample; iy++) {
         double yy = (double) y + ((double) iy)/((double) oversample) - cy;
         double yy2 = yy*yy;
         for (int ix = 0; ix < oversample; ix++) {
           double xx = (double) x + ((double) ix)/((double) oversample) - cx;
           double xx2 = xx*xx;
           double r = sqrt(yy2 + xx2);
 
           double ndr = (r - radius)/width;
 
           if (fabs(ndr) < 6) {
             double val = strength*exp(-2*ndr*ndr)/width*sqrt(2.0/M_PI);
             sum += val;
           }
         }
       }
 
       m_Data -> setValue(x, y, m_Data -> value(x,y) + sum/(oversample*oversample));
     }
   }
 
   newData(m_Data, QcepMaskDataPtr());
 }

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void QxrdDataProcessorBase::printMeasuredPolygon ( QVector< QPointF > poly )

slot

Definition at line 1781 of file qxrddataprocessorbase.cpp.

References printMessage(), and summarizeMeasuredPolygon().

Referenced by QxrdIntegratorPlot::setDataProcessor(), and QxrdCenterFinderPlot::setWindow().

 {
   foreach(QPointF pt, poly) {
     printMessage(tr("Measure pt (%1,%2)").arg(pt.x()).arg(pt.y()));
   }
 
   summarizeMeasuredPolygon(poly);
 }

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void QxrdDataProcessorBase::printMessage	(	QString	msg,
		QDateTime	ts = `QDateTime::currentDateTime()`
	)		const

slot

Definition at line 226 of file qxrddataprocessorbase.cpp.

References m_Experiment.

 {
   QxrdExperimentPtr exp(m_Experiment);
 
   if (exp) {
     exp->printMessage(msg, ts);
   }
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::processAcquiredDoubleImage	(	QcepDoubleImageDataPtr	processed,
		QcepDoubleImageDataPtr	image,
		QcepDoubleImageDataPtr	dark,
		QcepMaskDataPtr	mask,
		QcepMaskDataPtr	overflow
	)

protected

Definition at line 1312 of file qxrddataprocessorbase.cpp.

References processAcquiredImage().

 {
   return processAcquiredImage(processed, dimg, dark, mask, overflow);
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::processAcquiredDoubleImage	(	QcepDoubleImageDataPtr	processed,
		QcepDoubleImageDataPtr	image,
		QcepDoubleImageDataPtr	dark,
		QcepMaskDataPtr	mask,
		QcepMaskDataPtr	overflow,
		QcepDoubleList	v
	)

protected

Definition at line 1322 of file qxrddataprocessorbase.cpp.

References processAcquiredImage().

 {
   return processAcquiredImage(processed, dimg, dark, mask, overflow, v);
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::processAcquiredImage	(	QcepDoubleImageDataPtr	processed,
		QcepDoubleImageDataPtr	dimg,
		QcepDoubleImageDataPtr	dark,
		QcepMaskDataPtr	mask,
		QcepMaskDataPtr	overflow,
		QcepDoubleList	v = `QcepDoubleList()`
	)

protected

Definition at line 1333 of file qxrddataprocessorbase.cpp.

References correctBadPixels(), correctImageGains(), DEBUG_PROCESS, getAcquiredCount(), newData(), overflow(), printMessage(), qcepDebug(), saveNamedImageData(), saveNamedImageDataAsText(), statusMessage(), subtractDarkImage(), subtractedOutputDirectory(), and updateEstimatedTime().

Referenced by processAcquiredDoubleImage(), processAcquiredInt16Image(), and processAcquiredInt32Image().

 {
   if (processed && img) {
     processed->copyFrom(img);
 
     statusMessage(tr("Processing Image \"%1\"").arg(processed->get_FileName()));
 
     QTime tic;
     tic.start();
 
     if (v.length() > 0) {
       processed->set_Normalization(v);
     }
 
     if (qcepDebug(DEBUG_PROCESS)) {
       printMessage(tr("Processing Image \"%1\", image number %2, count %3")
                    .arg(processed->get_FileName()).arg(processed->get_ImageNumber()).arg(getAcquiredCount()));
     }
 
     if (get_PerformDarkSubtraction()) {
       subtractDarkImage(processed, dark);
       processed -> set_ObjectSaved(false);
 
       int subTime = tic.restart();
 
       updateEstimatedTime(prop_PerformDarkSubtractionTime(), subTime);
 
       if (qcepDebug(DEBUG_PROCESS)) {
         printMessage(tr("Dark subtraction took %1 msec").arg(subTime));
       }
     }
 
     if (get_PerformBadPixels()) {
       correctBadPixels(processed);
       processed -> set_ObjectSaved(false);
 
       int badPxlTime = tic.restart();
 
       updateEstimatedTime(prop_PerformBadPixelsTime(), badPxlTime);
 
       if (qcepDebug(DEBUG_PROCESS)) {
         printMessage(tr("Bad Pixel correction took %1 msec").arg(badPxlTime));
       }
     }
 
     if (get_PerformGainCorrection()) {
       correctImageGains(processed);
       processed -> set_ObjectSaved(false);
 
       int gainTime = tic.restart();
 
       updateEstimatedTime(prop_PerformGainCorrectionTime(), gainTime);
 
       if (qcepDebug(DEBUG_PROCESS)) {
         printMessage(tr("Gain correction took %1 msec").arg(gainTime));
       }
     }
 
     if (get_SaveSubtracted()) {
       if (processed->get_ObjectSaved()) {
         printMessage(tr("Image \"%1\" is already saved").arg(processed->rawFileName()));
       } else {
         saveNamedImageData(QDir(subtractedOutputDirectory()).filePath(processed->get_FileBase()), processed, overflow);
       }
     }
 
     if (get_SaveAsText()) {
       saveNamedImageDataAsText(processed->get_FileName(), processed, overflow);
 
       updateEstimatedTime(prop_SaveAsTextTime(), tic.elapsed());
     }
 
     newData(processed, overflow);
 
     if (qcepDebug(DEBUG_PROCESS)) {
       printMessage(tr("Processing took %1 msec").arg(tic.restart()));
     }
 
     statusMessage(tr("Completed Processing Image \"%1\"").arg(processed->get_FileName()));
   }
 
   return processed;
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::processAcquiredInt16Image	(	QcepDoubleImageDataPtr	processed,
		QcepInt16ImageDataPtr	image,
		QcepDoubleImageDataPtr	dark,
		QcepMaskDataPtr	mask,
		QcepMaskDataPtr	overflow
	)

protected

Definition at line 1248 of file qxrddataprocessorbase.cpp.

References DEBUG_PROCESS, getAcquiredCount(), NoOverwrite, overflow(), printMessage(), processAcquiredImage(), qcepDebug(), and saveNamedRawImageData().

 {
   if (qcepDebug(DEBUG_PROCESS)) {
     printMessage(tr("processing acquired 16 bit image, %1 remaining")
                  .arg(getAcquiredCount()));
   }
 
   if (img) {
     if (get_SaveRawImages()) {
       if (img->get_ObjectSaved()) {
         printMessage(tr("Image \"%1\" is already saved").arg(img->rawFileName()));
       } else {
         saveNamedRawImageData(img->rawFileName(), img, overflow, QxrdDataProcessorBase::NoOverwrite);
       }
     }
 
     corrected -> copyFrom(img);
     corrected -> set_DateTime(QDateTime::currentDateTime());
 
     processAcquiredImage(corrected, corrected, dark, mask, overflow);
 
     return corrected;
   } else {
     return QcepDoubleImageDataPtr();
   }
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::processAcquiredInt32Image	(	QcepDoubleImageDataPtr	processed,
		QcepInt32ImageDataPtr	image,
		QcepDoubleImageDataPtr	dark,
		QcepMaskDataPtr	mask,
		QcepMaskDataPtr	overflow
	)

protected

Definition at line 1280 of file qxrddataprocessorbase.cpp.

References DEBUG_PROCESS, getAcquiredCount(), NoOverwrite, overflow(), printMessage(), processAcquiredImage(), qcepDebug(), and saveNamedRawImageData().

 {
   if (qcepDebug(DEBUG_PROCESS)) {
     printMessage(tr("processing acquired 32 bit image, %1 remaining")
                  .arg(getAcquiredCount()));
   }
 
   if (img) {
     if (get_SaveRawImages()) {
       if (img->get_ObjectSaved()) {
         printMessage(tr("Image \"%1\" is already saved").arg(img->rawFileName()));
       } else {
         saveNamedRawImageData(img->rawFileName(), img, overflow, QxrdDataProcessorBase::NoOverwrite);
       }
     }
 
     corrected -> copyFrom(img);
     corrected -> set_DateTime(QDateTime::currentDateTime());
 
     processAcquiredImage(corrected, corrected, dark, mask, overflow);
 
     return corrected;
   } else {
     return QcepDoubleImageDataPtr();
   }
 }

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void QxrdDataProcessorBase::pushMaskStack ( QcepMaskDataPtr mask = QcepMaskDataPtr() )

slot

Definition at line 814 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, mask(), QcepAllocator::newMask(), newMask(), newMaskHeight(), newMaskWidth(), printMessage(), and QcepAllocator::WaitTillAvailable.

Referenced by findZingers(), and loadMask().

 {
   if (m == NULL) {
     m =  QcepAllocator::newMask(QcepAllocator::WaitTillAvailable,
                                 newMaskWidth(), newMaskHeight(), 0, this);
 
     if (mask()) {
       mask()->copyMaskTo(m);
     }
   }
 
   m_Masks.push_front(m);
 
 //  m_Mask = mask;
 
   printMessage(tr("dup mask, %1 on stack").arg(m_Masks.count()));
 
   m_Masks.changed();
 
   newMask();
 }

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QString QxrdDataProcessorBase::pwd ( ) const

slot

Definition at line 490 of file qxrddataprocessorbase.cpp.

References dataDirectory().

 {
   return dataDirectory();
 }

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QString QxrdDataProcessorBase::rawOutputDirectory ( ) const

slot

Definition at line 309 of file qxrddataprocessorbase.cpp.

References dataDirectory(), and existingOutputDirectory().

Referenced by filePathInRawOutputDirectory().

 {
   if (get_SaveRawInSubdirectory()) {
     return existingOutputDirectory(dataDirectory(), get_SaveRawSubdirectory());
   } else {
     return dataDirectory();
   }
 }

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void QxrdDataProcessorBase::readSettings	(	QSettings *	settings,
		QString	section
	)

virtual

Reimplemented from QcepObject.

Definition at line 213 of file qxrddataprocessorbase.cpp.

References m_CenterFinder, m_DistortionCorrection, m_Integrator, m_Mutex, m_PolarNormalization, m_PolarTransform, and QcepObject::readSettings().

 {
   QcepMutexLocker lock(__FILE__, __LINE__, &m_Mutex);
 
   QcepObject::readSettings(settings, section);
 
   m_CenterFinder -> readSettings(settings, section+"/centerfinder");
   m_Integrator   -> readSettings(settings, section+"/integrator");
   m_PolarTransform -> readSettings(settings, section+"/polarTransform");
   m_PolarNormalization -> readSettings(settings, section+"/polarNormalization");
   m_DistortionCorrection -> readSettings(settings, section+"/distortion");
 }

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void QxrdDataProcessorBase::reciprocalTail	(	double	cx,
		double	cy,
		double	strength,
		int	oversample
	)

slot

Definition at line 1998 of file qxrddataprocessorbase.cpp.

References m_Data, and newData().

 {
   int nr = m_Data -> get_Height();
   int nc = m_Data -> get_Width();
 
   for (int y=0; y<nr; y++) {
     for (int x=0; x<nc; x++) {
       double sum = 0;
 
       for (int iy = 0; iy < oversample; iy++) {
         double yy = (double) y + ((double) iy)/((double) oversample) - cy;
         double yy2 = yy*yy;
         for (int ix = 0; ix < oversample; ix++) {
           double xx = (double) x + ((double) ix)/((double) oversample) - cx;
           double xx2 = xx*xx;
           double r = sqrt(yy2 + xx2);
           sum += strength/r;
         }
       }
 
       m_Data -> setValue(x, y, m_Data -> value(x,y) + sum/(oversample*oversample));
     }
   }
 
   newData(m_Data, QcepMaskDataPtr());
 }

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void QxrdDataProcessorBase::rollMaskStack ( int amount )

slot

Definition at line 879 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, and newMask().

 {
   if (amount == 0) {
     return;
   } else if (amount > 1) {
     for (int i=0; i<amount; i++) {
       rollMaskStack(1);
     }
   } else if (amount < -1) {
     for (int i=0; i<(-amount); i++) {
       rollMaskStack(-1);
     }
   } else if (amount == 1) {
     QcepMaskDataPtr m = m_Masks.first();
     m_Masks.push_back(m);
     m_Masks.pop_front();
   } else if (amount == -1) {
     QcepMaskDataPtr m = m_Masks.last();
     m_Masks.push_front(m);
     m_Masks.pop_back();
   }
 
   m_Masks.changed();
 
   newMask();
 }

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void QxrdDataProcessorBase::saveBadPixels	(	QString	name,
		int	canOverwrite = `NoOverwrite`
	)

slot

Definition at line 678 of file qxrddataprocessorbase.cpp.

References filePathInDataDirectory(), m_BadPixels, and saveNamedImageData().

 {
   QString path = filePathInDataDirectory(name);
 
   if (m_BadPixels) {
     saveNamedImageData(path, m_BadPixels, QcepMaskDataPtr(), canOverwrite);
 
     set_BadPixelsPath(m_BadPixels -> get_FileName());
   }
 }

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void QxrdDataProcessorBase::saveCachedGeometry ( QString name )

slot

Definition at line 724 of file qxrddataprocessorbase.cpp.

References data(), filePathInDataDirectory(), m_Integrator, and saveNamedImageData().

 {
   QString path = filePathInDataDirectory(name);
 
   QcepInt32ImageDataPtr data = m_Integrator->cachedGeometry();
 
   if (data) {
     saveNamedImageData(path, data, QcepMaskDataPtr(), true);
   }
 }

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void QxrdDataProcessorBase::saveCachedIntensity ( QString name )

slot

Definition at line 735 of file qxrddataprocessorbase.cpp.

References data(), filePathInDataDirectory(), m_Integrator, and saveNamedImageData().

 {
   QString path = filePathInDataDirectory(name);
 
   QcepDoubleImageDataPtr data = m_Integrator->cachedIntensity();
 
   if (data) {
     saveNamedImageData(path, data, QcepMaskDataPtr(), true);
   }
 }

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void QxrdDataProcessorBase::saveDark	(	QString	name,
		int	canOverwrite = `NoOverwrite`
	)

slot

Definition at line 640 of file qxrddataprocessorbase.cpp.

References filePathInDataDirectory(), INVOKE_CHECK, m_DarkFrame, and saveNamedImageData().

 {
   if (QThread::currentThread() != thread()) {
     INVOKE_CHECK(QMetaObject::invokeMethod(this, "saveDark", Qt::BlockingQueuedConnection, Q_ARG(QString, name), Q_ARG(int, canOverwrite)))
   } else {
     QString path = filePathInDataDirectory(name);
 
     if (m_DarkFrame) {
       saveNamedImageData(path, m_DarkFrame, QcepMaskDataPtr(), canOverwrite);
 
       set_DarkImagePath(m_DarkFrame -> get_FileName());
     }
   }
 }

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void QxrdDataProcessorBase::saveData	(	QString	name,
		int	canOverwrite = `NoOverwrite`
	)

slot

Definition at line 561 of file qxrddataprocessorbase.cpp.

References filePathInDataDirectory(), INVOKE_CHECK, m_Data, and saveNamedImageData().

 {
   if (QThread::currentThread() != thread()) {
     INVOKE_CHECK(QMetaObject::invokeMethod(this, "saveData", Qt::BlockingQueuedConnection, Q_ARG(QString, name), Q_ARG(int, canOverwrite)))
   } else {
     QString path = filePathInDataDirectory(name);
 
     saveNamedImageData(path, m_Data, QcepMaskDataPtr(), canOverwrite);
 
     set_DataPath(m_Data -> get_FileName());
   }
 }

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void QxrdDataProcessorBase::saveData	(	QcepDataObjectPtr	object,
		QString	name,
		int	canOverwrite = `NoOverwrite`
	)

slot

Definition at line 574 of file qxrddataprocessorbase.cpp.

References filePathInDataDirectory(), INVOKE_CHECK, object, printMessage(), and saveNamedImageData().

 {
   if (QThread::currentThread() != thread()) {
     INVOKE_CHECK(QMetaObject::invokeMethod(this, "saveData",
                                            Qt::BlockingQueuedConnection,
                                            Q_ARG(QcepDataObjectPtr, object),
                                            Q_ARG(QString, name), Q_ARG(int, canOverwrite)))
   } else {
     QString path = filePathInDataDirectory(name);
 
     QcepDoubleImageDataPtr image = qSharedPointerDynamicCast<QcepDoubleImageData>(object);
 
     if (image) {
       saveNamedImageData(path, image, QcepMaskDataPtr(), canOverwrite);
     } else {
       printMessage(tr("Don't know how to save %1").arg(object->pathName()));
     }
   }
 }

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void QxrdDataProcessorBase::saveGainMap	(	QString	name,
		int	canOverwrite = `NoOverwrite`
	)

slot

Definition at line 713 of file qxrddataprocessorbase.cpp.

References filePathInDataDirectory(), m_GainMap, and saveNamedImageData().

 {
   QString path = filePathInDataDirectory(name);
 
   if (m_GainMap) {
     saveNamedImageData(path, m_GainMap, QcepMaskDataPtr(), canOverwrite);
 
     set_GainMapPath(m_GainMap -> get_FileName());
   }
 }

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void QxrdDataProcessorBase::saveMask	(	QString	name,
		int	canOverwrite = `NoOverwrite`
	)

slot

Definition at line 1146 of file qxrddataprocessorbase.cpp.

References filePathInDataDirectory(), mask(), and saveNamedMaskData().

 {
   QString path = filePathInDataDirectory(name);
 
   if (mask()) {
     saveNamedMaskData(path, mask(), canOverwrite);
 
     set_MaskPath(mask() -> get_FileName());
   }
 }

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void QxrdDataProcessorBase::saveNamedImageData	(	QString	name,
		QcepDoubleImageDataPtr	image,
		QcepMaskDataPtr	overflow,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1164 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

Referenced by processAcquiredImage(), saveBadPixels(), saveCachedGeometry(), saveCachedIntensity(), saveDark(), saveData(), and saveGainMap().

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveDoubleData(name, image, overflow, canOverwrite);
   }
 }

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void QxrdDataProcessorBase::saveNamedImageData	(	QString	name,
		QcepInt16ImageDataPtr	image,
		QcepMaskDataPtr	overflow,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1173 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveInt16Data(name, image, overflow, canOverwrite);
   }
 }

void QxrdDataProcessorBase::saveNamedImageData	(	QString	name,
		QcepInt32ImageDataPtr	image,
		QcepMaskDataPtr	overflow,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1191 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveInt32Data(name, image, overflow, canOverwrite);
   }
 }

void QxrdDataProcessorBase::saveNamedImageDataAsText	(	QString	name,
		QcepDoubleImageDataPtr	image,
		QcepMaskDataPtr	overflow,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1218 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

Referenced by processAcquiredImage().

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveTextData(name, image, overflow, canOverwrite);
   }
 }

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void QxrdDataProcessorBase::saveNamedMaskData	(	QString	name,
		QcepMaskDataPtr	mask,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1209 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

Referenced by saveMask().

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveMaskData(name, image, canOverwrite);
   }
 }

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void QxrdDataProcessorBase::saveNamedRawImageData	(	QString	name,
		QcepInt16ImageDataPtr	image,
		QcepMaskDataPtr	overflow,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1182 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

Referenced by processAcquiredInt16Image(), and processAcquiredInt32Image().

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveRaw16Data(name, image, overflow, canOverwrite);
   }
 }

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void QxrdDataProcessorBase::saveNamedRawImageData	(	QString	name,
		QcepInt32ImageDataPtr	image,
		QcepMaskDataPtr	overflow,
		int	canOverwrite = `NoOverwrite`
	)

protected

Definition at line 1200 of file qxrddataprocessorbase.cpp.

References m_FileSaver.

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     f -> saveRaw32Data(name, image, overflow, canOverwrite);
   }
 }

void QxrdDataProcessorBase::saveOutputScan ( QString fileName )

slot

Definition at line 2242 of file qxrddataprocessorbase.cpp.

References m_OutputScan.

 {
   if (m_OutputScan) {
 
   }
 }

void QxrdDataProcessorBase::setAcquisition ( QxrdAcquisitionWPtr acq )

Definition at line 157 of file qxrddataprocessorbase.cpp.

References m_Acquisition, updateEstimatedProcessingTime(), QcepDoubleProperty::valueChanged(), QcepIntProperty::valueChanged(), and QcepBoolProperty::valueChanged().

 {
   m_Acquisition = acq;
 
   connect(prop_SaveRawImages(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformDarkSubtraction(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformBadPixels(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformGainCorrection(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_SaveSubtracted(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_SaveAsText(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformIntegration(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_DisplayIntegratedData(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_SaveIntegratedData(), &QcepBoolProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformDarkSubtractionTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformBadPixelsTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformGainCorrectionTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_SaveSubtractedTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_SaveAsTextTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_PerformIntegrationTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_DisplayIntegratedDataTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   connect(prop_SaveIntegratedDataTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
 
   QxrdAcquisitionPtr acqp(m_Acquisition);
 
   if (acqp) {
     connect(acqp -> prop_SummedExposures(), &QcepIntProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
     connect(acqp -> prop_Raw16SaveTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
     connect(acqp -> prop_Raw32SaveTime(), &QcepDoubleProperty::valueChanged, this, &QxrdDataProcessorBase::updateEstimatedProcessingTime);
   }
 }

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void QxrdDataProcessorBase::setWindow ( QxrdWindowWPtr win )

Definition at line 188 of file qxrddataprocessorbase.cpp.

References m_Data, m_Window, newData(), and newMask().

 {
   m_Window = win;
   newData(m_Data, QcepMaskDataPtr());
   newMask();
 }

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void QxrdDataProcessorBase::showMaskAll ( )

slot

Definition at line 1653 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), mask(), and newMask().

Referenced by QxrdWindow::initialize(), and showMaskAllStack().

 {
   createMaskIfNeeded();
 
   if (mask()) {
     mask() -> showMaskAll();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::showMaskAllStack ( int pos )

slot

Definition at line 1070 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), newMask(), and showMaskAll().

 {
   int p = maskStackPosition(pos);
 
   if (p >= 0) {
     m_Masks[p] -> showMaskAll();
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::showMaskRange ( )

slot

Definition at line 1623 of file qxrddataprocessorbase.cpp.

Referenced by QxrdWindow::initialize(), showMaskRange(), and showMaskRangeStack().

 {
   double min = get_MaskMinimumValue();
   double max = get_MaskMaximumValue();
 
   showMaskRange(min, max);
 }

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void QxrdDataProcessorBase::showMaskRange	(	double	min,
		double	max
	)

slot

Definition at line 1631 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), m_Data, mask(), newMask(), and showMaskRange().

 {
   createMaskIfNeeded();
 
   if (m_Data && mask()) {
     mask() -> showMaskRange(QSharedPointer< QcepImageData<double> >(m_Data), min, max);
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::showMaskRangeStack ( int pos )

slot

Definition at line 1099 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Data, m_Masks, maskStackPosition(), newMask(), and showMaskRange().

 {
   int p = maskStackPosition(pos);
 
   double min = get_MaskMinimumValue();
   double max = get_MaskMaximumValue();
 
   if (m_Data && p >= 0) {
     m_Masks[p] -> showMaskRange(QSharedPointer< QcepImageData<double> >(m_Data), min, max);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::shrinkMask ( )

slot

Definition at line 1704 of file qxrddataprocessorbase.cpp.

References createMaskIfNeeded(), mask(), and newMask().

Referenced by shrinkMaskStack().

 {
   createMaskIfNeeded();
 
   if (mask()) {
     mask() -> shrinkMask();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::shrinkMaskStack ( int pos )

slot

Definition at line 1044 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), newMask(), and shrinkMask().

 {
   int p = maskStackPosition(pos);
 
   if (p >= 0) {
     m_Masks[p] -> shrinkMask();
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::shutdown ( )

slot

Definition at line 152 of file qxrddataprocessorbase.cpp.

 {
   thread()->exit();
 }

virtual void QxrdDataProcessorBase::slicePolygon ( QVector< QPointF > poly )

pure virtualslot

int QxrdDataProcessorBase::status ( double delay )

slot

Definition at line 1893 of file qxrddataprocessorbase.cpp.

References getAcquiredCount(), and m_ProcessWaiting.

 {
   QMutex mutex;
   QcepMutexLocker lock(__FILE__, __LINE__, &mutex);
 
   if (getAcquiredCount() == 0) {
     return 1;
   }
 
   if (m_ProcessWaiting.wait(&mutex, (int)(time*1000))) {
     return getAcquiredCount()==0;
   } else {
     return 0;
   }
 }

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void QxrdDataProcessorBase::statusMessage	(	QString	msg,
		QDateTime	ts = `QDateTime::currentDateTime()`
	)		const

slot

Definition at line 244 of file qxrddataprocessorbase.cpp.

References m_Experiment.

Referenced by QxrdDataProcessorThreaded::addImages(), QxrdDataProcessorThreaded::correlateImages(), QxrdDataProcessorThreaded::integrateAndAccumulate(), QxrdDataProcessorThreaded::integrateData(), processAcquiredImage(), QxrdDataProcessorThreaded::processData(), QxrdDataProcessorThreaded::projectImages(), QxrdDataProcessorThreaded::subtractImages(), QxrdDataProcessorThreaded::sumImages(), and summarizeMeasuredPolygon().

 {
   QxrdExperimentPtr exp(m_Experiment);
 
   if (exp) {
     exp->statusMessage(msg, ts);
   }
 }

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void QxrdDataProcessorBase::subtractDark ( )

slot

Definition at line 2295 of file qxrddataprocessorbase.cpp.

References m_DarkFrame, m_Data, and subtractDarkImage().

 {
   QcepDoubleImageDataPtr dat = m_Data;
   QcepDoubleImageDataPtr dark = m_DarkFrame;
 
   subtractDarkImage(dat, dark);
 }

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void QxrdDataProcessorBase::subtractDarkImage	(	QcepDoubleImageDataPtr	image,
		QcepDoubleImageDataPtr	dark
	)

protected

Definition at line 1430 of file qxrddataprocessorbase.cpp.

References printMessage(), and QcepImageDataBase::SubtractedData.

Referenced by QxrdDataProcessorThreaded::addImages(), QxrdDataProcessorThreaded::correlateImages(), QxrdDataProcessorThreaded::idleInt16Image(), loadData(), processAcquiredImage(), QxrdDataProcessorThreaded::projectImages(), subtractDark(), QxrdDataProcessorThreaded::subtractImages(), and QxrdDataProcessorThreaded::sumImages().

 {
   //  if (get_PerformDarkSubtraction()) {
   if (dark && image) {
     if (dark->get_ExposureTime() != image->get_ExposureTime()) {
       printMessage("Exposure times of acquired data and dark image are different, skipping");
       return;
     }
 
     if (dark->get_Width() != image->get_Width() ||
         dark->get_Height() != image->get_Height()) {
       printMessage("Dimensions of acquired data and dark image are different, skipping");
       return;
     }
 
     if (dark->get_CameraGain() != image->get_CameraGain()) {
       printMessage("Gains of acquired data and dark image are different, skipping");
       return;
     }
 
 //    if (!(image->get_DataType() == QcepDoubleImageData::Raw16Data ||
 //          image->get_DataType() == QcepDoubleImageData::Raw32Data)) {
 //      printMessage("Acquired data is not a raw image, skipping background subtraction");
 //      return;
 //    }
 
     QcepMutexLocker lock1(__FILE__, __LINE__, dark->mutex());
     QcepMutexLocker lock2(__FILE__, __LINE__, image->mutex());
 
     int height = image->get_Height();
     int width  = image->get_Width();
     int nres = image-> get_SummedExposures();
     int ndrk = dark -> get_SummedExposures();
     int npixels = width*height;
 
     if (nres <= 0) nres = 1;
 
     double ratio = ((double) nres)/((double) ndrk);
 
     //      printf("Dark subtraction nres=%d, ndrk=%d, npixels=%d, ratio=%g\n",
     //             nres, ndrk, npixels, ratio);
 
     double *result = image->data();
     double *dk     = dark->data();
     double avgraw  = 0;
     //      double avgdark = 0;
 
     for (int i=0; i<npixels; i++) {
       //        avgdark  += dk[i];
       avgraw   += result[i];
       result[i] = result[i]-ratio*dk[i];
     }
 
     //      set_AverageDark(avgdark/npixels/ndrk);
     set_AverageRaw(avgraw/npixels/nres);
     set_Average(get_AverageRaw() - get_AverageDark());
 
     image -> set_DataType(QcepDoubleImageData::SubtractedData);
   }
   //  }
 }

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QString QxrdDataProcessorBase::subtractedOutputDirectory ( ) const

slot

Definition at line 323 of file qxrddataprocessorbase.cpp.

References dataDirectory(), and existingOutputDirectory().

Referenced by filePathInSubtractedOutputDirectory(), and processAcquiredImage().

 {
   if (get_SaveSubtractedInSubdirectory()) {
     return existingOutputDirectory(dataDirectory(), get_SaveSubtractedSubdirectory());
   } else {
     return dataDirectory();
   }
 }

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void QxrdDataProcessorBase::summarizeMeasuredPolygon ( QVector< QPointF > poly )

slot

Definition at line 1790 of file qxrddataprocessorbase.cpp.

References statusMessage().

Referenced by measurePolygon(), and printMeasuredPolygon().

 {
   if (poly.size() >= 3) {
     double x0 = poly[0].x();
     double y0 = poly[0].y();
     double x1 = poly[1].x();
     double y1 = poly[1].y();
     double x2 = poly[2].x();
     double y2 = poly[2].y();
     double dx1 = x0-x1, dy1 = y0-y1, dx2 = x2-x1, dy2 = y2-y1;
     double a1 = atan2(dy1,dx1), a2 = atan2(dy2,dx2);
 
     statusMessage(tr("Angle: @ %1,%2, ang %3 deg").arg(x1).arg(y1).arg((a2-a1)/M_PI*180.0));
   } else if (poly.size() == 2) {
     double x0 = poly[0].x();
     double y0 = poly[0].y();
     double x1 = poly[1].x();
     double y1 = poly[1].y();
     double dx = x1-x0;
     double dy = y1-y0;
     double ang = atan2(dy,dx);
     double len = sqrt(dx*dx+dy*dy);
 
     statusMessage(tr("Line: %1,%2 - %3,%4 : D %5,%6 : L %7 : Ang %8").
                        arg(x0).arg(y0).arg(x1).arg(y1).
                        arg(dx).arg(dy).arg(len).arg(ang/M_PI*180.0));
 
   } else if (poly.size() == 1) {
     statusMessage(tr("Point: %1,%2").arg(poly[0].x()).arg(poly[0].y()));
   }
 }

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QcepDoubleImageDataPtr QxrdDataProcessorBase::takeNextFreeImage	(	int	width,
		int	height
	)

Definition at line 346 of file qxrddataprocessorbase.cpp.

References QcepAllocator::AlwaysAllocate, and QcepAllocator::newDoubleImage().

 {
   QcepDoubleImageDataPtr res = QcepAllocator::newDoubleImage(QcepAllocator::AlwaysAllocate,
                                                              width, height, this);
 
   return res;
 }

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void QxrdDataProcessorBase::unsubtractDark ( )

slot

Definition at line 2303 of file qxrddataprocessorbase.cpp.

References m_DarkFrame, m_Data, and unsubtractDarkImage().

 {
   QcepDoubleImageDataPtr dat = m_Data;
   QcepDoubleImageDataPtr dark = m_DarkFrame;
 
   unsubtractDarkImage(dat, dark);
 }

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void QxrdDataProcessorBase::unsubtractDarkImage	(	QcepDoubleImageDataPtr	image,
		QcepDoubleImageDataPtr	dark
	)

protected

Definition at line 1492 of file qxrddataprocessorbase.cpp.

References printMessage(), and QcepImageDataBase::SubtractedData.

Referenced by unsubtractDark().

 {
   //  if (get_PerformDarkSubtraction()) {
   if (dark && image) {
     if (dark->get_ExposureTime() != image->get_ExposureTime()) {
       printMessage("Exposure times of acquired data and dark image are different, skipping");
       return;
     }
 
     if (dark->get_Width() != image->get_Width() ||
         dark->get_Height() != image->get_Height()) {
       printMessage("Dimensions of acquired data and dark image are different, skipping");
       return;
     }
 
     if (dark->get_CameraGain() != image->get_CameraGain()) {
       printMessage("Gains of acquired data and dark image are different, skipping");
       return;
     }
 
 //    if (!(image->get_DataType() == QcepDoubleImageData::Raw16Data ||
 //          image->get_DataType() == QcepDoubleImageData::Raw32Data)) {
 //      printMessage("Acquired data is not a raw image, skipping background subtraction");
 //      return;
 //    }
 
     QcepMutexLocker lock1(__FILE__, __LINE__, dark->mutex());
     QcepMutexLocker lock2(__FILE__, __LINE__, image->mutex());
 
     int height = image->get_Height();
     int width  = image->get_Width();
     int nres = image-> get_SummedExposures();
     int ndrk = dark -> get_SummedExposures();
     int npixels = width*height;
 
     if (nres <= 0) nres = 1;
 
     double ratio = ((double) nres)/((double) ndrk);
 
     //      printf("Dark subtraction nres=%d, ndrk=%d, npixels=%d, ratio=%g\n",
     //             nres, ndrk, npixels, ratio);
 
     double *result = image->data();
     double *dk     = dark->data();
     double avgraw  = 0;
     //      double avgdark = 0;
 
     for (int i=0; i<npixels; i++) {
       //        avgdark  += dk[i];
       avgraw   += result[i];
       result[i] = result[i]+ratio*dk[i];
     }
 
     //      set_AverageDark(avgdark/npixels/ndrk);
     set_AverageRaw(avgraw/npixels/nres);
     set_Average(get_AverageRaw() - get_AverageDark());
 
     image -> set_DataType(QcepDoubleImageData::SubtractedData);
   }
   //  }
 }

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void QxrdDataProcessorBase::updateEstimatedProcessingTime ( )

slot

Definition at line 1569 of file qxrddataprocessorbase.cpp.

References estimatedProcessingTime, and m_Acquisition.

Referenced by setAcquisition().

 {
   double estSerialTime = 0, estParallelTime = 0;
 
   QxrdAcquisitionPtr acq(m_Acquisition);
 
   if (acq && get_SaveRawImages()) {
     if (acq -> get_SummedExposures() > 1) {
       estSerialTime += acq -> get_Raw32SaveTime();
     } else {
       estSerialTime += acq -> get_Raw16SaveTime();
     }
   }
 
   if (get_PerformDarkSubtraction()) {
     estParallelTime += get_PerformDarkSubtractionTime();
   }
 
   if (get_PerformBadPixels()) {
     estParallelTime += get_PerformBadPixelsTime();
   }
 
   if (get_PerformGainCorrection()) {
     estParallelTime += get_PerformGainCorrectionTime();
   }
 
   if (get_SaveSubtracted()) {
     estSerialTime += get_SaveSubtractedTime();
   }
 
   if (get_SaveAsText()) {
     estSerialTime += get_SaveAsTextTime();
   }
 
   if (get_PerformIntegration()) {
     estParallelTime += get_PerformIntegrationTime();
   }
 
   if (get_DisplayIntegratedData()) {
     estSerialTime += get_DisplayIntegratedDataTime();
   }
 
   if (get_SaveIntegratedData()) {
     estSerialTime += get_SaveIntegratedDataTime();
   }
 
   set_EstimatedProcessingTime(estimatedProcessingTime(estSerialTime, estParallelTime));
 }

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void QxrdDataProcessorBase::updateEstimatedTime	(	QcepDoubleProperty *	prop,
		int	msec
	)

Definition at line 1423 of file qxrddataprocessorbase.cpp.

Referenced by processAcquiredImage().

 {
   double newVal = prop -> value() * (1.0 - get_AveragingRatio()) + ((double) msec)/1000.0* get_AveragingRatio();
 
   prop -> setValue(newVal);
 }

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void QxrdDataProcessorBase::writeOutputScan ( QcepIntegratedDataPtr d )

slot

Definition at line 2092 of file qxrddataprocessorbase.cpp.

References data(), integratedOutputDirectory(), m_Experiment, and m_FileSaver.

Referenced by QxrdDataProcessorThreaded::onIntegratedDataAvailable().

 {
   QxrdFileSaverPtr f(m_FileSaver);
 
   if (f) {
     if (this->get_SaveIntegratedData()) {
       QxrdExperimentPtr expt(m_Experiment);
 
       if (expt) {
         expt->openScanFile();
         f->writeOutputScan(expt->scanFile(), data);
       }
     }
 
     if (this->get_SaveIntegratedInSeparateFiles()) {
       f->writeOutputScan(integratedOutputDirectory(), data);
     }
   }
 }

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void QxrdDataProcessorBase::writeOutputScan	(	QVector< double >	x,
		QVector< double >	y
	)

protected

void QxrdDataProcessorBase::writeSettings	(	QSettings *	settings,
		QString	section
	)

virtual

Reimplemented from QcepObject.

Definition at line 200 of file qxrddataprocessorbase.cpp.

References m_CenterFinder, m_DistortionCorrection, m_Integrator, m_Mutex, m_PolarNormalization, m_PolarTransform, and QcepObject::writeSettings().

 {
   QcepMutexLocker lock(__FILE__, __LINE__, &m_Mutex);
 
   QcepObject::writeSettings(settings, section);
 
   m_CenterFinder -> writeSettings(settings, section+"/centerfinder");
   m_Integrator   -> writeSettings(settings, section+"/integrator");
   m_PolarTransform -> writeSettings(settings, section+"/polarTransform");
   m_PolarNormalization -> writeSettings(settings, section+"/polarNormalization");
   m_DistortionCorrection -> writeSettings(settings, section+"/distortion");
 }

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void QxrdDataProcessorBase::xorMaskStack ( int pos )

slot

Definition at line 954 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0)) {
     QcepMaskDataPtr pm = m_Masks[p1];
 
     m_Masks[p0] -> xorMask(pm);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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void QxrdDataProcessorBase::xorNotMaskStack ( int pos )

slot

Definition at line 1002 of file qxrddataprocessorbase.cpp.

References QxrdMaskStack::changed(), m_Masks, maskStackPosition(), and newMask().

 {
   int p0 = maskStackPosition(0);
   int p1 = maskStackPosition(pos);
 
   if ((p0 >= 0) && (p1 >= 0)) {
     QcepMaskDataPtr pm = m_Masks[p1];
 
     m_Masks[p0] -> xorNotMask(pm);
 
     m_Masks.changed();
 
     newMask();
   }
 }

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Member Data Documentation

QAtomicInt QxrdDataProcessorBase::m_AcquiredCount

protected

Definition at line 482 of file qxrddataprocessorbase.h.

Referenced by decrementAcquiredCount(), getAcquiredCount(), and incrementAcquiredCount().

QcepInt16ImageQueue QxrdDataProcessorBase::m_AcquiredInt16Images

protected

Definition at line 470 of file qxrddataprocessorbase.h.

QcepInt32ImageQueue QxrdDataProcessorBase::m_AcquiredInt32Images

protected

Definition at line 471 of file qxrddataprocessorbase.h.

QxrdAcquisitionWPtr QxrdDataProcessorBase::m_Acquisition

protected

Definition at line 468 of file qxrddataprocessorbase.h.

Referenced by setAcquisition(), and updateEstimatedProcessingTime().

QcepDoubleImageDataPtr QxrdDataProcessorBase::m_BadPixels

protected

Definition at line 474 of file qxrddataprocessorbase.h.

Referenced by badPixels(), newBadPixelsImage(), and saveBadPixels().

QxrdCenterFinderPtr QxrdDataProcessorBase::m_CenterFinder

protected

Definition at line 484 of file qxrddataprocessorbase.h.

Referenced by centerFinder(), QxrdDataProcessorThreaded::integrateSaveAndDisplay(), newData(), QxrdDataProcessorBase(), readSettings(), and writeSettings().

QcepDoubleImageDataPtr QxrdDataProcessorBase::m_DarkFrame

protected

Definition at line 473 of file qxrddataprocessorbase.h.

Referenced by darkImage(), newDarkImage(), saveDark(), subtractDark(), and unsubtractDark().

QcepDoubleImageDataPtr QxrdDataProcessorBase::m_Data

protected

Definition at line 472 of file qxrddataprocessorbase.h.

Referenced by calculateHistogram(), calculateROI(), data(), ellipse(), exponentialTail(), findZingers(), hideMaskRange(), hideMaskRangeStack(), integrateRectangle(), measurePolygon(), multiplyData(), newData(), newImage(), offsetData(), powderRing(), reciprocalTail(), saveData(), setWindow(), showMaskRange(), showMaskRangeStack(), QxrdDataProcessorThreaded::slicePolygon(), subtractDark(), and unsubtractDark().

QxrdDistortionCorrectionPtr QxrdDataProcessorBase::m_DistortionCorrection

protected

Definition at line 493 of file qxrddataprocessorbase.h.

Referenced by distortionCorrection(), QxrdDataProcessorBase(), readSettings(), and writeSettings().

QxrdExperimentWPtr QxrdDataProcessorBase::m_Experiment

protected

Definition at line 464 of file qxrddataprocessorbase.h.

Referenced by criticalMessage(), dataDirectory(), experiment(), experimentDirectory(), printMessage(), QxrdDataProcessorThreaded::projectImages(), QxrdDataProcessorBase(), QxrdDataProcessorThreaded::setFileNormalization(), statusMessage(), and writeOutputScan().

QxrdFileSaverWPtr QxrdDataProcessorBase::m_FileSaver

protected

Definition at line 467 of file qxrddataprocessorbase.h.

Referenced by QxrdDataProcessorThreaded::fixupBadBackgroundSubtraction(), saveNamedImageData(), saveNamedImageDataAsText(), saveNamedMaskData(), saveNamedRawImageData(), and writeOutputScan().

QcepDoubleImageDataPtr QxrdDataProcessorBase::m_GainMap

protected

Definition at line 475 of file qxrddataprocessorbase.h.

Referenced by gainMap(), newGainMapImage(), and saveGainMap().

QxrdGenerateTestImagePtr QxrdDataProcessorBase::m_GenerateTestImage

protected

Definition at line 489 of file qxrddataprocessorbase.h.

Referenced by generateTestImage(), QxrdDataProcessor::initialize(), and QxrdDataProcessorBase().

QxrdIntegratorPtr QxrdDataProcessorBase::m_Integrator

protected

Definition at line 485 of file qxrddataprocessorbase.h.

Referenced by QxrdDataProcessorThreaded::clearAccumulator(), QxrdDataProcessorThreaded::integrateAndAccumulate(), QxrdDataProcessorThreaded::integrateSaveAndDisplay(), integrator(), QxrdDataProcessorThreaded::onIntegratedDataAvailable(), QxrdDataProcessorBase(), readSettings(), QxrdDataProcessorThreaded::saveAccumulator(), saveCachedGeometry(), saveCachedIntensity(), QxrdDataProcessorThreaded::slicePolygon(), and writeSettings().

QcepDoubleImageDataPtr QxrdDataProcessorBase::m_LiveData

protected

Definition at line 476 of file qxrddataprocessorbase.h.

Referenced by QxrdDataProcessorThreaded::idleInt16Image(), and liveData().

QxrdMaskStack QxrdDataProcessorBase::m_Masks

protected

QMutex QxrdDataProcessorBase::m_Mutex

mutableprivate

Definition at line 461 of file qxrddataprocessorbase.h.

Referenced by readSettings(), and writeSettings().

QcepIntegratedDataPtr QxrdDataProcessorBase::m_OutputScan

protected

Definition at line 491 of file qxrddataprocessorbase.h.

Referenced by appendToOutputScan(), newOutputScan(), plotOutputScan(), and saveOutputScan().

QcepMaskDataPtr QxrdDataProcessorBase::m_Overflow

protected

Definition at line 478 of file qxrddataprocessorbase.h.

Referenced by newData(), and overflow().

QxrdPolarNormalizationPtr QxrdDataProcessorBase::m_PolarNormalization

protected

Definition at line 487 of file qxrddataprocessorbase.h.

Referenced by polarNormalization(), QxrdDataProcessorBase(), readSettings(), and writeSettings().

QxrdPolarTransformPtr QxrdDataProcessorBase::m_PolarTransform

protected

Definition at line 486 of file qxrddataprocessorbase.h.

Referenced by polarTransform(), QxrdDataProcessorBase(), readSettings(), and writeSettings().

QWaitCondition QxrdDataProcessorBase::m_ProcessWaiting

protected

Definition at line 469 of file qxrddataprocessorbase.h.

Referenced by decrementAcquiredCount(), and status().

QcepSettingsSaverWPtr QxrdDataProcessorBase::m_Saver

protected

Definition at line 465 of file qxrddataprocessorbase.h.

QxrdWindowWPtr QxrdDataProcessorBase::m_Window

protected

Definition at line 466 of file qxrddataprocessorbase.h.

Referenced by newData(), newMask(), and setWindow().

enum { ... } QxrdDataProcessorBase::ZingerConstants

Property Documentation

bool QxrdDataProcessorBase::accumulateIntegrated2D

readwrite

Definition at line 142 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::accumulateIntegratedDirectory

readwrite

Definition at line 148 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::accumulateIntegratedFileName

readwrite

Definition at line 151 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::accumulateIntegratedFormat

readwrite

Definition at line 154 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::accumulateIntegratedName

readwrite

Definition at line 145 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::average

readwrite

Definition at line 205 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::averageDark

readwrite

Definition at line 208 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::averageRaw

readwrite

Definition at line 211 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::averagingRatio

readwrite

Definition at line 184 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::badPixelsPath

readwrite

Definition at line 61 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::correctionQueueLength

readwrite

Definition at line 214 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::darkImagePath

readwrite

Definition at line 58 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::dataPath

readwrite

Definition at line 55 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::displayIntegratedData

readwrite

Definition at line 106 of file qxrddataprocessorbase.h.

Referenced by QxrdDataProcessorThreaded::onIntegratedDataAvailable().

double QxrdDataProcessorBase::displayIntegratedDataTime

readwrite

Definition at line 175 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::estimatedProcessingTime

readwrite

Definition at line 181 of file qxrddataprocessorbase.h.

Referenced by updateEstimatedProcessingTime().

QString QxrdDataProcessorBase::fileName

readwrite

Definition at line 52 of file qxrddataprocessorbase.h.

Referenced by fileWriteTest(), and loadDefaultImages().

QString QxrdDataProcessorBase::gainMapPath

readwrite

Definition at line 64 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::integrationQueueLength

readwrite

Definition at line 217 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::maskCircleRadius

readwrite

Definition at line 196 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::maskMaximumValue

readwrite

Definition at line 193 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::maskMinimumValue

readwrite

Definition at line 190 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::maskPath

readwrite

Definition at line 67 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::maskSetPixels

readwrite

Definition at line 199 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::performBadPixels

readwrite

Definition at line 82 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::performBadPixelsTime

readwrite

Definition at line 160 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::performDarkSubtraction

readwrite

Definition at line 73 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::performDarkSubtractionTime

readwrite

Definition at line 157 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::performGainCorrection

readwrite

Definition at line 85 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::performGainCorrectionTime

readwrite

Definition at line 163 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::performIntegration

readwrite

Definition at line 103 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::performIntegrationTime

readwrite

Definition at line 172 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveAsText

readwrite

Definition at line 91 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::saveAsTextPerLine

readwrite

Definition at line 97 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::saveAsTextSeparator

readwrite

Definition at line 94 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::saveAsTextTime

readwrite

Definition at line 169 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveDarkImages

readwrite

Definition at line 79 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveDarkInSubdirectory

readwrite

Definition at line 115 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::saveDarkSubdirectory

readwrite

Definition at line 118 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveIntegratedData

readwrite

Definition at line 109 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::saveIntegratedDataTime

readwrite

Definition at line 178 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveIntegratedInSeparateFiles

readwrite

Definition at line 133 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveIntegratedInSubdirectory

readwrite

Definition at line 136 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::saveIntegratedPath

readwrite

Definition at line 112 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::saveIntegratedSubdirectory

readwrite

Definition at line 139 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveOverflowFiles

readwrite

Definition at line 100 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveRawImages

readwrite

Definition at line 76 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveRawInSubdirectory

readwrite

Definition at line 121 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::saveRawSubdirectory

readwrite

Definition at line 124 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::saverQueueLength

readwrite

Definition at line 220 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveSubtracted

readwrite

Definition at line 88 of file qxrddataprocessorbase.h.

bool QxrdDataProcessorBase::saveSubtractedInSubdirectory

readwrite

Definition at line 127 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::saveSubtractedSubdirectory

readwrite

Definition at line 130 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::saveSubtractedTime

readwrite

Definition at line 166 of file qxrddataprocessorbase.h.

QString QxrdDataProcessorBase::scriptPath

readwrite

Definition at line 70 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::zingerAlgorithm

readwrite

Definition at line 223 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::zingerDestination

readwrite

Definition at line 229 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::zingerMask

readwrite

Definition at line 226 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::zingerSize1

readwrite

Definition at line 232 of file qxrddataprocessorbase.h.

int QxrdDataProcessorBase::zingerSize2

readwrite

Definition at line 235 of file qxrddataprocessorbase.h.

double QxrdDataProcessorBase::zingerThreshold

readwrite

Definition at line 238 of file qxrddataprocessorbase.h.

The documentation for this class was generated from the following files:

Public Types

Public Slots

Signals

Public Member Functions

Public Attributes

Protected Member Functions

Protected Attributes

Properties

Private Attributes

Additional Inherited Members

Detailed Description

Member Enumeration Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

Property Documentation